Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.98□□□□□ -0.33
UBE2AP49459 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2AP49459 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.98□□□□□ -0.33
UBE2AP49459 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.98□□□□□ -0.33
UBE2AP49459 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2AP49459 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC12.98□□□□□ -0.33
UBE2AP49459 AC005837.3-201ENST00000612163 286 ntBASIC12.98□□□□□ -0.33
UBE2AP49459 NARF-205ENST00000412079 1760 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2AP49459 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
UBE2AP49459 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2AP49459 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2AP49459 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.97□□□□□ -0.33
UBE2AP49459 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UBE2AP49459 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2AP49459 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 AC055733.4-201ENST00000638462 1354 ntBASIC12.97□□□□□ -0.33
UBE2AP49459 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2AP49459 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2AP49459 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 AC105265.2-201ENST00000467189 838 ntBASIC12.97□□□□□ -0.33
UBE2AP49459 SUDS3P1-201ENST00000505831 966 ntBASIC12.97□□□□□ -0.33
UBE2AP49459 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2AP49459 AL031432.3-201ENST00000607698 485 ntBASIC12.97□□□□□ -0.33
UBE2AP49459 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2AP49459 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2AP49459 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
UBE2AP49459 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2AP49459 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2AP49459 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UBE2AP49459 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 IRS3P-201ENST00000223076 1006 ntBASIC12.96□□□□□ -0.33
UBE2AP49459 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2AP49459 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
UBE2AP49459 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 AC079140.4-201ENST00000507448 529 ntBASIC12.96□□□□□ -0.33
UBE2AP49459 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2AP49459 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2AP49459 MIR6084-201ENST00000622012 110 ntBASIC12.96□□□□□ -0.33
UBE2AP49459 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.96□□□□□ -0.33
UBE2AP49459 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2AP49459 AL049796.1-201ENST00000565336 1766 ntBASIC12.96□□□□□ -0.34
UBE2AP49459 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2AP49459 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
UBE2AP49459 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
UBE2AP49459 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2AP49459 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBE2AP49459 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2AP49459 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2AP49459 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms