Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KRT6CP48668 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KRT6CP48668 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 SLC7A5P2-201ENST00000553010 536 ntBASIC19.84■□□□□ 0.77
KRT6CP48668 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.84■□□□□ 0.77
KRT6CP48668 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
KRT6CP48668 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6CP48668 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6CP48668 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6CP48668 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6CP48668 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT6CP48668 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6CP48668 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6CP48668 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
KRT6CP48668 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6CP48668 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT6CP48668 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KRT6CP48668 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6CP48668 AC116050.2-201ENST00000612102 1779 ntBASIC19.83■□□□□ 0.76
KRT6CP48668 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
KRT6CP48668 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KRT6CP48668 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT6CP48668 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT6CP48668 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT6CP48668 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6CP48668 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6CP48668 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6CP48668 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT6CP48668 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KRT6CP48668 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT6CP48668 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6CP48668 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6CP48668 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KRT6CP48668 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6CP48668 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT6CP48668 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT6CP48668 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6CP48668 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT6CP48668 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
KRT6CP48668 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 AC004854.2-201ENST00000608450 1441 ntBASIC19.8■□□□□ 0.76
KRT6CP48668 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms