Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YCR108CYCR108C 192 nt2.64□□□□□ -1.99
UPF3P48412 PRM8YGL053W 714 nt2.64□□□□□ -1.99
UPF3P48412 YIL058WYIL058W 285 nt2.64□□□□□ -1.99
UPF3P48412 MBB1YJL199C 327 nt2.64□□□□□ -1.99
UPF3P48412 YJR023CYJR023C 402 nt2.64□□□□□ -1.99
UPF3P48412 EAF6YJR082C 342 nt2.64□□□□□ -1.99
UPF3P48412 SGM1YJR134C 2124 nt2.64□□□□□ -1.99
UPF3P48412 VPS51YKR020W 495 nt2.64□□□□□ -1.99
UPF3P48412 RPL37AYLR185W 267 nt2.64□□□□□ -1.99
UPF3P48412 YHC1YLR298C 696 nt2.64□□□□□ -1.99
UPF3P48412 JIP3YLR331C 378 nt2.64□□□□□ -1.99
UPF3P48412 HSC82YMR186W 2118 nt2.64□□□□□ -1.99
UPF3P48412 PHO80YOL001W 882 nt2.64□□□□□ -1.99
UPF3P48412 TRS20YBR254C 528 nt2.64□□□□□ -1.99
UPF3P48412 YLR278CYLR278C 4026 nt2.64□□□□□ -1.99
UPF3P48412 GIS1YDR096W 2685 nt2.63□□□□□ -1.99
UPF3P48412 CRD1YDL142C 852 nt2.63□□□□□ -1.99
UPF3P48412 YGR121W-AYGR121W-A 216 nt2.63□□□□□ -1.99
UPF3P48412 COX14YML129C 213 nt2.63□□□□□ -1.99
UPF3P48412 RPL25YOL127W 429 nt2.63□□□□□ -1.99
UPF3P48412 LCL1YPL056C 306 nt2.63□□□□□ -1.99
UPF3P48412 SSY1YDR160W 2559 nt2.63□□□□□ -1.99
UPF3P48412 SUL1YBR294W 2580 nt2.63□□□□□ -1.99
UPF3P48412 ISW1YBR245C 3390 nt2.63□□□□□ -1.99
UPF3P48412 INP51YIL002C 2841 nt2.62□□□□□ -1.99
UPF3P48412 IRC4YDR540C 540 nt2.62□□□□□ -1.99
UPF3P48412 CAJ1YER048C 1176 nt2.62□□□□□ -1.99
UPF3P48412 ACB1YGR037C 264 nt2.62□□□□□ -1.99
UPF3P48412 YML037CYML037C 1023 nt2.62□□□□□ -1.99
UPF3P48412 SWM2YNR004W 441 nt2.62□□□□□ -1.99
UPF3P48412 SVS1YPL163C 783 nt2.62□□□□□ -1.99
UPF3P48412 ORC2YBR060C 1863 nt2.62□□□□□ -1.99
UPF3P48412 DPB11YJL090C 2295 nt2.62□□□□□ -1.99
UPF3P48412 NUM1YDR150W 8247 nt2.62□□□□□ -1.99
UPF3P48412 YEL043WYEL043W 2871 nt2.62□□□□□ -1.99
UPF3P48412 ROY1YMR258C 1662 nt2.61□□□□□ -1.99
UPF3P48412 SDC1YDR469W 528 nt2.61□□□□□ -1.99
UPF3P48412 YDR509WYDR509W 348 nt2.61□□□□□ -1.99
UPF3P48412 MTC7YEL033W 420 nt2.61□□□□□ -1.99
UPF3P48412 TIM10YHR005C-A 282 nt2.61□□□□□ -1.99
UPF3P48412 HYR1YIR037W 492 nt2.61□□□□□ -1.99
UPF3P48412 RAM2YKL019W 951 nt2.61□□□□□ -1.99
UPF3P48412 YOL013W-BYOL013W-B 291 nt2.61□□□□□ -1.99
UPF3P48412 MGR1YCL044C 1254 nt2.61□□□□□ -1.99
UPF3P48412 SWR1YDR334W 4545 nt2.61□□□□□ -1.99
UPF3P48412 RRP12YPL012W 3687 nt2.61□□□□□ -1.99
UPF3P48412 ESC1YMR219W 4977 nt2.61□□□□□ -1.99
UPF3P48412 SRB8YCR081W 4284 nt2.61□□□□□ -1.99
UPF3P48412 UTP13YLR222C 2454 nt2.61□□□□□ -1.99
UPF3P48412 AYT1YLL063C 1425 nt2.6□□□□□ -1.99
UPF3P48412 JIP5YPR169W 1479 nt2.6□□□□□ -1.99
UPF3P48412 RPL14BYHL001W 417 nt2.6□□□□□ -1.99
UPF3P48412 BCK1YJL095W 4437 nt2.6□□□□□ -1.99
UPF3P48412 KRE33YNL132W 3171 nt2.59□□□□□ -1.99
UPF3P48412 TWF1YGR080W 999 nt2.59□□□□□ -1.99
UPF3P48412 TPM2YIL138C 486 nt2.59□□□□□ -1.99
UPF3P48412 TRA1YHR099W 11235 nt2.58□□□□□ -2
UPF3P48412 YDR199WYDR199W 366 nt2.58□□□□□ -2
UPF3P48412 YIL030W-AYIL030W-A 339 nt2.58□□□□□ -2
UPF3P48412 YPL068CYPL068C 882 nt2.58□□□□□ -2
UPF3P48412 ACM1YPL267W 630 nt2.58□□□□□ -2
UPF3P48412 PTC5YOR090C 1719 nt2.58□□□□□ -2
UPF3P48412 TRS130YMR218C 3309 nt2.58□□□□□ -2
UPF3P48412 NUP100YKL068W 2880 nt2.58□□□□□ -2
UPF3P48412 BRO1YPL084W 2535 nt2.58□□□□□ -2
UPF3P48412 YDR239CYDR239C 2364 nt2.57□□□□□ -2
UPF3P48412 YGL165CYGL165C 579 nt2.57□□□□□ -2
UPF3P48412 GPI14YJR013W 1212 nt2.57□□□□□ -2
UPF3P48412 CMS1YLR003C 876 nt2.57□□□□□ -2
UPF3P48412 LCL2YLR104W 396 nt2.57□□□□□ -2
UPF3P48412 YMR320WYMR320W 306 nt2.57□□□□□ -2
UPF3P48412 YBR085C-AYBR085C-A 258 nt2.57□□□□□ -2
UPF3P48412 UBP11YKR098C 2154 nt2.57□□□□□ -2
UPF3P48412 PFF1YBR074W 2931 nt2.57□□□□□ -2
UPF3P48412 RGA2YDR379W 3030 nt2.57□□□□□ -2
UPF3P48412 MDM32YOR147W 1869 nt2.56□□□□□ -2
UPF3P48412 ASG1YIL130W 2895 nt2.56□□□□□ -2
UPF3P48412 MSB2YGR014W 3921 nt2.56□□□□□ -2
UPF3P48412 RRP6YOR001W 2202 nt2.56□□□□□ -2
UPF3P48412 FMP16YDR070C 282 nt2.56□□□□□ -2
UPF3P48412 HYP2YEL034W 474 nt2.56□□□□□ -2
UPF3P48412 YFR056CYFR056C 369 nt2.56□□□□□ -2
UPF3P48412 RNR4YGR180C 1038 nt2.56□□□□□ -2
UPF3P48412 PEP8YJL053W 1140 nt2.56□□□□□ -2
UPF3P48412 YKL044WYKL044W 321 nt2.56□□□□□ -2
UPF3P48412 URA10YMR271C 684 nt2.56□□□□□ -2
UPF3P48412 RPB11YOL005C 363 nt2.56□□□□□ -2
UPF3P48412 RPS12YOR369C 432 nt2.56□□□□□ -2
UPF3P48412 SNU56YDR240C 1479 nt2.56□□□□□ -2
UPF3P48412 YPL150WYPL150W 2706 nt2.55□□□□□ -2
UPF3P48412 RPO41YFL036W 4056 nt2.55□□□□□ -2
UPF3P48412 YDR220CYDR220C 294 nt2.55□□□□□ -2
UPF3P48412 YGL014C-AYGL014C-A 162 nt2.55□□□□□ -2
UPF3P48412 YHR078WYHR078W 1659 nt2.55□□□□□ -2
UPF3P48412 RGL1YPL066W 1440 nt2.55□□□□□ -2
UPF3P48412 YPL197CYPL197C 414 nt2.55□□□□□ -2
UPF3P48412 YBR277CYBR277C 402 nt2.55□□□□□ -2
UPF3P48412 AAD16YFL057C 459 nt2.54□□□□□ -2
UPF3P48412 RPL9AYGL147C 576 nt2.54□□□□□ -2
UPF3P48412 YLR458WYLR458W 381 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms