Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 PDS5YMR076C 3834 nt3.61□□□□□ -1.83
RPN3P40016 YGR265WYGR265W 411 nt3.61□□□□□ -1.83
RPN3P40016 YBL073WYBL073W 312 nt3.61□□□□□ -1.83
RPN3P40016 UBP5YER144C 2418 nt3.61□□□□□ -1.83
RPN3P40016 TAF6YGL112C 1551 nt3.6□□□□□ -1.83
RPN3P40016 Q0092Q0092 141 nt3.6□□□□□ -1.83
RPN3P40016 RPL30YGL030W 318 nt3.6□□□□□ -1.83
RPN3P40016 ANB1YJR047C 474 nt3.6□□□□□ -1.83
RPN3P40016 YOR073W-AYOR073W-A 234 nt3.6□□□□□ -1.83
RPN3P40016 YPR099CYPR099C 357 nt3.6□□□□□ -1.83
RPN3P40016 ARK1YNL020C 1917 nt3.6□□□□□ -1.83
RPN3P40016 POL1YNL102W 4407 nt3.59□□□□□ -1.83
RPN3P40016 FAA2YER015W 2235 nt3.59□□□□□ -1.83
RPN3P40016 SEG1YMR086W 2883 nt3.59□□□□□ -1.83
RPN3P40016 PSF1YDR013W 627 nt3.59□□□□□ -1.83
RPN3P40016 RPS22BYLR367W 393 nt3.59□□□□□ -1.83
RPN3P40016 RPL9BYNL067W 576 nt3.59□□□□□ -1.83
RPN3P40016 VHR2YER064C 1518 nt3.59□□□□□ -1.84
RPN3P40016 MYO3YKL129C 3819 nt3.58□□□□□ -1.84
RPN3P40016 TRZ1YKR079C 2517 nt3.58□□□□□ -1.84
RPN3P40016 GEP4YHR100C 558 nt3.58□□□□□ -1.84
RPN3P40016 MRP8YKL142W 660 nt3.58□□□□□ -1.84
RPN3P40016 YLR416CYLR416C 399 nt3.58□□□□□ -1.84
RPN3P40016 SHH3YMR118C 591 nt3.58□□□□□ -1.84
RPN3P40016 GOT1YMR292W 417 nt3.58□□□□□ -1.84
RPN3P40016 YPR053CYPR053C 456 nt3.58□□□□□ -1.84
RPN3P40016 YBR085C-AYBR085C-A 258 nt3.58□□□□□ -1.84
RPN3P40016 snR51snR51 107 nt3.58□□□□□ -1.84
RPN3P40016 YHR078WYHR078W 1659 nt3.58□□□□□ -1.84
RPN3P40016 REC8YPR007C 2043 nt3.58□□□□□ -1.84
RPN3P40016 SPP382YLR424W 2127 nt3.58□□□□□ -1.84
RPN3P40016 YRM1YOR172W 2361 nt3.58□□□□□ -1.84
RPN3P40016 AUS1YOR011W 4185 nt3.57□□□□□ -1.84
RPN3P40016 RRP5YMR229C 5190 nt3.57□□□□□ -1.84
RPN3P40016 PCF11YDR228C 1881 nt3.57□□□□□ -1.84
RPN3P40016 YDR250CYDR250C 276 nt3.57□□□□□ -1.84
RPN3P40016 tV(CAC)DtV(CAC)D 73 nt3.57□□□□□ -1.84
RPN3P40016 tV(CAC)HtV(CAC)H 73 nt3.57□□□□□ -1.84
RPN3P40016 TIM8YJR135W-A 264 nt3.57□□□□□ -1.84
RPN3P40016 CIN1YOR349W 3045 nt3.56□□□□□ -1.84
RPN3P40016 tC(GCA)BtC(GCA)B 72 nt3.56□□□□□ -1.84
RPN3P40016 tC(GCA)GtC(GCA)G 72 nt3.56□□□□□ -1.84
RPN3P40016 YDR169C-AYDR169C-A 150 nt3.56□□□□□ -1.84
RPN3P40016 tC(GCA)P1tC(GCA)P1 72 nt3.56□□□□□ -1.84
RPN3P40016 tC(GCA)P2tC(GCA)P2 72 nt3.56□□□□□ -1.84
RPN3P40016 RPB9YGL070C 369 nt3.56□□□□□ -1.84
RPN3P40016 YGL188C-AYGL188C-A 141 nt3.56□□□□□ -1.84
RPN3P40016 POG1YIL122W 1056 nt3.56□□□□□ -1.84
RPN3P40016 PSY1YKL076C 384 nt3.56□□□□□ -1.84
RPN3P40016 RPL26AYLR344W 384 nt3.56□□□□□ -1.84
RPN3P40016 YHR080CYHR080C 4038 nt3.56□□□□□ -1.84
RPN3P40016 XRS2YDR369C 2565 nt3.56□□□□□ -1.84
RPN3P40016 COX1Q0045 1605 nt3.55□□□□□ -1.84
RPN3P40016 KHA1YJL094C 2622 nt3.55□□□□□ -1.84
RPN3P40016 TSA2YDR453C 591 nt3.55□□□□□ -1.84
RPN3P40016 YER079C-AYER079C-A 339 nt3.55□□□□□ -1.84
RPN3P40016 tT(UGU)Q1tT(UGU)Q1 76 nt3.55□□□□□ -1.84
RPN3P40016 HYR1YIR037W 492 nt3.55□□□□□ -1.84
RPN3P40016 YMR046W-AYMR046W-A 129 nt3.55□□□□□ -1.84
RPN3P40016 ISU1YPL135W 498 nt3.55□□□□□ -1.84
RPN3P40016 YGR237CYGR237C 2358 nt3.55□□□□□ -1.84
RPN3P40016 IRC10YOL015W 1761 nt3.55□□□□□ -1.84
RPN3P40016 CWC22YGR278W 1734 nt3.55□□□□□ -1.84
RPN3P40016 STU2YLR045C 2667 nt3.55□□□□□ -1.84
RPN3P40016 RAD26YJR035W 3258 nt3.54□□□□□ -1.84
RPN3P40016 BYE1YKL005C 1785 nt3.54□□□□□ -1.84
RPN3P40016 ARG2YJL071W 1725 nt3.54□□□□□ -1.84
RPN3P40016 YEL032C-AYEL032C-A 162 nt3.54□□□□□ -1.84
RPN3P40016 YER023C-AYER023C-A 213 nt3.54□□□□□ -1.84
RPN3P40016 COX23YHR116W 456 nt3.54□□□□□ -1.84
RPN3P40016 TMA10YLR327C 261 nt3.54□□□□□ -1.84
RPN3P40016 RSM19YNR037C 276 nt3.54□□□□□ -1.84
RPN3P40016 snR42snR42 351 nt3.54□□□□□ -1.84
RPN3P40016 CCT7YJL111W 1653 nt3.54□□□□□ -1.84
RPN3P40016 STN1YDR082W 1485 nt3.54□□□□□ -1.84
RPN3P40016 FLO10YKR102W 3510 nt3.53□□□□□ -1.84
RPN3P40016 EMC1YCL045C 2283 nt3.53□□□□□ -1.84
RPN3P40016 FAP7YDL166C 594 nt3.53□□□□□ -1.84
RPN3P40016 YDR406W-AYDR406W-A 246 nt3.53□□□□□ -1.84
RPN3P40016 YJL197C-AYJL197C-A 282 nt3.53□□□□□ -1.84
RPN3P40016 YAR070CYAR070C 300 nt3.53□□□□□ -1.84
RPN3P40016 YPR077CYPR077C 372 nt3.53□□□□□ -1.84
RPN3P40016 PKH1YDR490C 2301 nt3.52□□□□□ -1.85
RPN3P40016 COX7YMR256C 183 nt3.52□□□□□ -1.85
RPN3P40016 YPR014CYPR014C 330 nt3.52□□□□□ -1.85
RPN3P40016 YPR022CYPR022C 3402 nt3.52□□□□□ -1.85
RPN3P40016 NOP4YPL043W 2058 nt3.51□□□□□ -1.85
RPN3P40016 PDC2YDR081C 2778 nt3.51□□□□□ -1.85
RPN3P40016 URB2YJR041C 3525 nt3.5□□□□□ -1.85
RPN3P40016 STT4YLR305C 5703 nt3.5□□□□□ -1.85
RPN3P40016 CCM1YGR150C 2595 nt3.5□□□□□ -1.85
RPN3P40016 HEF3YNL014W 3135 nt3.5□□□□□ -1.85
RPN3P40016 CDC36YDL165W 576 nt3.5□□□□□ -1.85
RPN3P40016 tF(GAA)DtF(GAA)D 73 nt3.5□□□□□ -1.85
RPN3P40016 tF(GAA)NtF(GAA)N 73 nt3.5□□□□□ -1.85
RPN3P40016 HPA3YEL066W 540 nt3.5□□□□□ -1.85
RPN3P40016 YGL149WYGL149W 306 nt3.5□□□□□ -1.85
RPN3P40016 RKM1YPL208W 1752 nt3.5□□□□□ -1.85
RPN3P40016 CDH1YGL003C 1701 nt3.5□□□□□ -1.85
RPN3P40016 TPS2YDR074W 2691 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 69.1 ms