Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
CHI3L1P36222 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHI3L1P36222 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHI3L1P36222 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHI3L1P36222 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHI3L1P36222 KRT16P2-201ENST00000414673 1423 ntBASIC19.38■□□□□ 0.69
CHI3L1P36222 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.38■□□□□ 0.69
CHI3L1P36222 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.38■□□□□ 0.69
CHI3L1P36222 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHI3L1P36222 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHI3L1P36222 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
CHI3L1P36222 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHI3L1P36222 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.37■□□□□ 0.69
CHI3L1P36222 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.37■□□□□ 0.69
CHI3L1P36222 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHI3L1P36222 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHI3L1P36222 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHI3L1P36222 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHI3L1P36222 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHI3L1P36222 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHI3L1P36222 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.36■□□□□ 0.69
CHI3L1P36222 AC010141.2-201ENST00000452426 721 ntBASIC19.36■□□□□ 0.69
CHI3L1P36222 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHI3L1P36222 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.36■□□□□ 0.69
CHI3L1P36222 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CHI3L1P36222 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHI3L1P36222 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CHI3L1P36222 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHI3L1P36222 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHI3L1P36222 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHI3L1P36222 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 MIR638-201ENST00000385237 100 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L2-201ENST00000561772 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 AC104187.1-201ENST00000607510 612 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L6-201ENST00000626483 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L1-201ENST00000627662 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L8-201ENST00000629013 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L3-201ENST00000630187 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L7-201ENST00000630678 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 DUX4L5-201ENST00000630834 1275 ntBASIC19.35■□□□□ 0.69
CHI3L1P36222 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CHI3L1P36222 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHI3L1P36222 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHI3L1P36222 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CHI3L1P36222 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHI3L1P36222 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CHI3L1P36222 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHI3L1P36222 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.34■□□□□ 0.69
CHI3L1P36222 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHI3L1P36222 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHI3L1P36222 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHI3L1P36222 RARRES2P11-201ENST00000635158 484 ntBASIC19.34■□□□□ 0.69
CHI3L1P36222 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
CHI3L1P36222 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHI3L1P36222 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.34■□□□□ 0.69
CHI3L1P36222 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHI3L1P36222 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHI3L1P36222 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHI3L1P36222 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHI3L1P36222 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms