Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX11P35716 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX11P35716 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX11P35716 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SOX11P35716 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX11P35716 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX11P35716 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SOX11P35716 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SOX11P35716 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.94■□□□□ 0.78
SOX11P35716 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX11P35716 RAP2CP1-201ENST00000605103 478 ntBASIC19.94■□□□□ 0.78
SOX11P35716 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX11P35716 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX11P35716 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SOX11P35716 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SOX11P35716 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX11P35716 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SOX11P35716 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX11P35716 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SOX11P35716 ID1-201ENST00000376105 1233 ntBASIC19.93■□□□□ 0.78
SOX11P35716 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SOX11P35716 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX11P35716 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.93■□□□□ 0.78
SOX11P35716 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.92■□□□□ 0.78
SOX11P35716 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX11P35716 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX11P35716 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.92■□□□□ 0.78
SOX11P35716 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SOX11P35716 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SOX11P35716 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SOX11P35716 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SOX11P35716 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX11P35716 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
SOX11P35716 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX11P35716 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX11P35716 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX11P35716 CDCA4P2-201ENST00000441182 718 ntBASIC19.91■□□□□ 0.78
SOX11P35716 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.91■□□□□ 0.78
SOX11P35716 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX11P35716 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX11P35716 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX11P35716 AC073111.5-205ENST00000641717 521 ntBASIC19.91■□□□□ 0.78
SOX11P35716 AC138932.1-201ENST00000534164 6830 ntBASIC19.91■□□□□ 0.78
SOX11P35716 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SOX11P35716 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX11P35716 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX11P35716 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SOX11P35716 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 AC073314.1-201ENST00000568729 2216 ntBASIC19.9■□□□□ 0.78
SOX11P35716 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SOX11P35716 AFG3L1P-217ENST00000557444 2447 ntBASIC19.9■□□□□ 0.78
SOX11P35716 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX11P35716 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms