Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR1EP28566 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTR1EP28566 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTR1EP28566 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HTR1EP28566 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
HTR1EP28566 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HTR1EP28566 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.61■□□□□ 0.73
HTR1EP28566 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HTR1EP28566 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.61■□□□□ 0.73
HTR1EP28566 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.61■□□□□ 0.73
HTR1EP28566 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.61■□□□□ 0.73
HTR1EP28566 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTR1EP28566 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HTR1EP28566 PCDHAC2-203ENST00000615316 3011 ntBASIC19.61■□□□□ 0.73
HTR1EP28566 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.61■□□□□ 0.73
HTR1EP28566 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.61■□□□□ 0.73
HTR1EP28566 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR1EP28566 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.6■□□□□ 0.73
HTR1EP28566 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR1EP28566 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR1EP28566 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR1EP28566 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.6■□□□□ 0.73
HTR1EP28566 AC006015.1-201ENST00000429970 570 ntBASIC19.6■□□□□ 0.73
HTR1EP28566 AC105233.4-201ENST00000642045 216 ntBASIC19.6■□□□□ 0.73
HTR1EP28566 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTR1EP28566 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HTR1EP28566 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
HTR1EP28566 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.59■□□□□ 0.73
HTR1EP28566 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 CDCA4P2-201ENST00000441182 718 ntBASIC19.59■□□□□ 0.73
HTR1EP28566 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.59■□□□□ 0.73
HTR1EP28566 AC073111.5-205ENST00000641717 521 ntBASIC19.59■□□□□ 0.73
HTR1EP28566 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 AL512408.1-201ENST00000569378 2000 ntBASIC19.59■□□□□ 0.73
HTR1EP28566 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.59■□□□□ 0.73
HTR1EP28566 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.59■□□□□ 0.73
HTR1EP28566 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTR1EP28566 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HTR1EP28566 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HTR1EP28566 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.58■□□□□ 0.72
HTR1EP28566 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.58■□□□□ 0.72
HTR1EP28566 RAP2CP1-201ENST00000605103 478 ntBASIC19.58■□□□□ 0.72
HTR1EP28566 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.58■□□□□ 0.72
HTR1EP28566 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.58■□□□□ 0.72
HTR1EP28566 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
HTR1EP28566 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.57■□□□□ 0.72
HTR1EP28566 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HTR1EP28566 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.57■□□□□ 0.72
HTR1EP28566 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HTR1EP28566 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.57■□□□□ 0.72
HTR1EP28566 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.57■□□□□ 0.72
HTR1EP28566 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.57■□□□□ 0.72
HTR1EP28566 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.57■□□□□ 0.72
HTR1EP28566 SMUG1P1-201ENST00000590640 811 ntBASIC19.57■□□□□ 0.72
HTR1EP28566 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HTR1EP28566 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.57■□□□□ 0.72
HTR1EP28566 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
HTR1EP28566 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HTR1EP28566 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
HTR1EP28566 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HTR1EP28566 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms