Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.7■□□□□ 0.9
XPAP23025 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.7■□□□□ 0.9
XPAP23025 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.7■□□□□ 0.9
XPAP23025 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.7■□□□□ 0.9
XPAP23025 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
XPAP23025 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
XPAP23025 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
XPAP23025 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
XPAP23025 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 AL024507.2-201ENST00000606070 2574 ntBASIC20.69■□□□□ 0.9
XPAP23025 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.69■□□□□ 0.9
XPAP23025 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 MCRIP2P1-201ENST00000394346 511 ntBASIC20.69■□□□□ 0.9
XPAP23025 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
XPAP23025 AC069152.1-201ENST00000438030 544 ntBASIC20.69■□□□□ 0.9
XPAP23025 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.69■□□□□ 0.9
XPAP23025 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.69■□□□□ 0.9
XPAP23025 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
XPAP23025 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XPAP23025 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
XPAP23025 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.68■□□□□ 0.9
XPAP23025 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
XPAP23025 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
XPAP23025 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.68■□□□□ 0.9
XPAP23025 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.68■□□□□ 0.9
XPAP23025 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
XPAP23025 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.68■□□□□ 0.9
XPAP23025 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPAP23025 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.67■□□□□ 0.9
XPAP23025 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
XPAP23025 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
XPAP23025 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
XPAP23025 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.67■□□□□ 0.9
XPAP23025 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.67■□□□□ 0.9
XPAP23025 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.67■□□□□ 0.9
XPAP23025 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.67■□□□□ 0.9
XPAP23025 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.67■□□□□ 0.9
XPAP23025 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.67■□□□□ 0.9
XPAP23025 CYP2T3P-201ENST00000601990 817 ntBASIC20.67■□□□□ 0.9
XPAP23025 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.67■□□□□ 0.9
XPAP23025 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
XPAP23025 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
XPAP23025 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPAP23025 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPAP23025 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
XPAP23025 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.66■□□□□ 0.9
XPAP23025 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
XPAP23025 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.66■□□□□ 0.9
XPAP23025 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPAP23025 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
XPAP23025 AC092118.2-201ENST00000613495 667 ntBASIC20.66■□□□□ 0.9
XPAP23025 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.66■□□□□ 0.9
XPAP23025 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
XPAP23025 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
XPAP23025 AL049796.1-201ENST00000565336 1766 ntBASIC20.66■□□□□ 0.9
XPAP23025 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
XPAP23025 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPAP23025 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPAP23025 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
XPAP23025 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
XPAP23025 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
XPAP23025 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
XPAP23025 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.65■□□□□ 0.9
XPAP23025 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.65■□□□□ 0.9
XPAP23025 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms