Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CAPN3P20807 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
CAPN3P20807 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.71■□□□□ 0.75
CAPN3P20807 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 AC105233.4-201ENST00000642045 216 ntBASIC19.71■□□□□ 0.75
CAPN3P20807 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CAPN3P20807 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN3P20807 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CAPN3P20807 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN3P20807 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN3P20807 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN3P20807 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.7■□□□□ 0.74
CAPN3P20807 AC123595.1-201ENST00000440769 1046 ntBASIC19.7■□□□□ 0.74
CAPN3P20807 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN3P20807 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.7■□□□□ 0.74
CAPN3P20807 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN3P20807 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN3P20807 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN3P20807 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.69■□□□□ 0.74
CAPN3P20807 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.69■□□□□ 0.74
CAPN3P20807 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.69■□□□□ 0.74
CAPN3P20807 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN3P20807 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.69■□□□□ 0.74
CAPN3P20807 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN3P20807 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN3P20807 AC061975.6-201ENST00000579045 1553 ntBASIC19.69■□□□□ 0.74
CAPN3P20807 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN3P20807 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPN3P20807 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN3P20807 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN3P20807 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.68■□□□□ 0.74
CAPN3P20807 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN3P20807 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.68■□□□□ 0.74
CAPN3P20807 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN3P20807 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN3P20807 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN3P20807 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN3P20807 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 EEF1DP3-203ENST00000566025 782 ntBASIC19.67■□□□□ 0.74
CAPN3P20807 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CAPN3P20807 AL358852.1-201ENST00000623174 1268 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms