Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 KRT16P3-201ENST00000439127 1283 ntBASIC17.94■□□□□ 0.46
RAB3BP20337 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3BP20337 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3BP20337 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAB3BP20337 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3BP20337 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAB3BP20337 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3BP20337 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAB3BP20337 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3BP20337 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAB3BP20337 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
RAB3BP20337 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.93■□□□□ 0.46
RAB3BP20337 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3BP20337 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAB3BP20337 SLC47A1P1-202ENST00000449666 945 ntBASIC17.93■□□□□ 0.46
RAB3BP20337 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 SMUG1P1-201ENST00000590640 811 ntBASIC17.93■□□□□ 0.46
RAB3BP20337 AL138724.1-201ENST00000606771 1088 ntBASIC17.93■□□□□ 0.46
RAB3BP20337 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAB3BP20337 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB3BP20337 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3BP20337 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3BP20337 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3BP20337 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB3BP20337 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 AC009299.2-201ENST00000482477 511 ntBASIC17.92■□□□□ 0.46
RAB3BP20337 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3BP20337 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3BP20337 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3BP20337 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAB3BP20337 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3BP20337 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3BP20337 SYT6-210ENST00000641643 1587 ntBASIC17.91■□□□□ 0.46
RAB3BP20337 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB3BP20337 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.91■□□□□ 0.46
RAB3BP20337 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB3BP20337 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3BP20337 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3BP20337 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB3BP20337 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB3BP20337 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB3BP20337 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
RAB3BP20337 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB3BP20337 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
RAB3BP20337 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB3BP20337 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3BP20337 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
RAB3BP20337 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB3BP20337 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms