Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN1P18031 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN1P18031 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PTPN1P18031 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN1P18031 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN1P18031 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN1P18031 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN1P18031 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN1P18031 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PTPN1P18031 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.76■■□□□ 1.07
PTPN1P18031 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.76■■□□□ 1.07
PTPN1P18031 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTPN1P18031 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.76■■□□□ 1.07
PTPN1P18031 AC005229.4-201ENST00000610085 2198 ntBASIC21.76■■□□□ 1.07
PTPN1P18031 AL589743.5-201ENST00000616611 1050 ntBASIC21.76■■□□□ 1.07
PTPN1P18031 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTPN1P18031 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN1P18031 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN1P18031 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN1P18031 AC007375.3-201ENST00000600936 2314 ntBASIC21.75■■□□□ 1.07
PTPN1P18031 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 AC087633.2-202ENST00000565166 1439 ntBASIC21.75■■□□□ 1.07
PTPN1P18031 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PTPN1P18031 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.75■■□□□ 1.07
PTPN1P18031 DUSP5P2-201ENST00000426873 1033 ntBASIC21.75■■□□□ 1.07
PTPN1P18031 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN1P18031 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN1P18031 AC091874.3-201ENST00000512672 1195 ntBASIC21.75■■□□□ 1.07
PTPN1P18031 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 PLK5-205ENST00000642079 1969 ntBASIC21.75■■□□□ 1.07
PTPN1P18031 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
PTPN1P18031 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN1P18031 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN1P18031 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PTPN1P18031 AC027702.1-201ENST00000563810 1770 ntBASIC21.74■■□□□ 1.07
PTPN1P18031 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN1P18031 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN1P18031 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN1P18031 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PTPN1P18031 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN1P18031 AC097658.1-201ENST00000475555 843 ntBASIC21.74■■□□□ 1.07
PTPN1P18031 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN1P18031 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN1P18031 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN1P18031 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 MYC-209ENST00000641252 345 ntBASIC21.74■■□□□ 1.07
PTPN1P18031 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN1P18031 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN1P18031 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.74■■□□□ 1.07
PTPN1P18031 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PTPN1P18031 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.73■■□□□ 1.07
PTPN1P18031 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN1P18031 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PTPN1P18031 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.73■■□□□ 1.07
PTPN1P18031 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN1P18031 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.73■■□□□ 1.07
PTPN1P18031 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.73■■□□□ 1.07
PTPN1P18031 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN1P18031 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN1P18031 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN1P18031 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN1P18031 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN1P18031 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
PTPN1P18031 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN1P18031 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN1P18031 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN1P18031 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms