Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.34■□□□□ 0.53
PPP3CBP16298 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.34■□□□□ 0.53
PPP3CBP16298 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PPP3CBP16298 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.34■□□□□ 0.53
PPP3CBP16298 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PPP3CBP16298 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.34■□□□□ 0.53
PPP3CBP16298 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PPP3CBP16298 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PPP3CBP16298 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PPP3CBP16298 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 AC003102.1-202ENST00000563394 1796 ntBASIC18.34■□□□□ 0.53
PPP3CBP16298 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.34■□□□□ 0.53
PPP3CBP16298 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.34■□□□□ 0.53
PPP3CBP16298 AL391422.3-201ENST00000603791 2761 ntBASIC18.34■□□□□ 0.53
PPP3CBP16298 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPP3CBP16298 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PPP3CBP16298 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPP3CBP16298 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
PPP3CBP16298 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPP3CBP16298 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPP3CBP16298 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PPP3CBP16298 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.33■□□□□ 0.52
PPP3CBP16298 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.33■□□□□ 0.52
PPP3CBP16298 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 MIR4758-201ENST00000577688 71 ntBASIC18.33■□□□□ 0.52
PPP3CBP16298 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PPP3CBP16298 AL591742.1-201ENST00000604433 565 ntBASIC18.33■□□□□ 0.52
PPP3CBP16298 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPP3CBP16298 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 AL157384.1-201ENST00000445995 2473 ntBASIC18.33■□□□□ 0.52
PPP3CBP16298 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPP3CBP16298 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPP3CBP16298 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PPP3CBP16298 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PPP3CBP16298 RBM17P2-201ENST00000616397 1405 ntBASIC18.32■□□□□ 0.52
PPP3CBP16298 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP3CBP16298 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PPP3CBP16298 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP3CBP16298 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PPP3CBP16298 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 AC069152.1-201ENST00000438030 544 ntBASIC18.32■□□□□ 0.52
PPP3CBP16298 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 AL138781.1-201ENST00000566567 1274 ntBASIC18.32■□□□□ 0.52
PPP3CBP16298 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PPP3CBP16298 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PPP3CBP16298 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP3CBP16298 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP3CBP16298 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PPP3CBP16298 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.32■□□□□ 0.52
PPP3CBP16298 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP3CBP16298 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PPP3CBP16298 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP3CBP16298 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP3CBP16298 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP3CBP16298 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP3CBP16298 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP3CBP16298 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP3CBP16298 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP3CBP16298 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP3CBP16298 MKRN4P-201ENST00000444706 1521 ntBASIC18.31■□□□□ 0.52
PPP3CBP16298 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PPP3CBP16298 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP3CBP16298 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PPP3CBP16298 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP3CBP16298 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPP3CBP16298 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PPP3CBP16298 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP3CBP16298 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PPP3CBP16298 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PPP3CBP16298 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP3CBP16298 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CBP16298 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.3■□□□□ 0.52
PPP3CBP16298 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CBP16298 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PPP3CBP16298 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms