Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNB1P11230 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.89■□□□□ 0.93
CHRNB1P11230 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNB1P11230 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNB1P11230 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNB1P11230 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNB1P11230 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNB1P11230 KRT18P21-201ENST00000515767 1272 ntBASIC20.88■□□□□ 0.93
CHRNB1P11230 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNB1P11230 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.88■□□□□ 0.93
CHRNB1P11230 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNB1P11230 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 AC120498.8-201ENST00000614275 531 ntBASIC20.88■□□□□ 0.93
CHRNB1P11230 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 AL049637.2-201ENST00000641778 930 ntBASIC20.88■□□□□ 0.93
CHRNB1P11230 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNB1P11230 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB1P11230 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHRNB1P11230 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNB1P11230 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNB1P11230 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNB1P11230 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNB1P11230 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB1P11230 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB1P11230 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CHRNB1P11230 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNB1P11230 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHRNB1P11230 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNB1P11230 AP001412.1-201ENST00000608405 714 ntBASIC20.86■□□□□ 0.93
CHRNB1P11230 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB1P11230 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB1P11230 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB1P11230 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB1P11230 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB1P11230 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNB1P11230 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 AC127496.7-201ENST00000625110 1798 ntBASIC20.85■□□□□ 0.93
CHRNB1P11230 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRNB1P11230 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB1P11230 FAM99A-202ENST00000538190 1989 ntBASIC20.85■□□□□ 0.93
CHRNB1P11230 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB1P11230 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNB1P11230 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CHRNB1P11230 AC239809.2-201ENST00000415381 517 ntBASIC20.85■□□□□ 0.93
CHRNB1P11230 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB1P11230 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB1P11230 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHRNB1P11230 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB1P11230 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNB1P11230 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB1P11230 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB1P11230 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHRNB1P11230 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.84■□□□□ 0.93
CHRNB1P11230 TSPY15P-201ENST00000457163 923 ntBASIC20.84■□□□□ 0.93
CHRNB1P11230 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.84■□□□□ 0.93
CHRNB1P11230 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNB1P11230 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHRNB1P11230 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNB1P11230 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms