Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
FAM228BP0C875 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.89■■□□□ 1.1
FAM228BP0C875 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
FAM228BP0C875 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.89■■□□□ 1.1
FAM228BP0C875 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.1
FAM228BP0C875 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FAM228BP0C875 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
FAM228BP0C875 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
FAM228BP0C875 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.89■■□□□ 1.09
FAM228BP0C875 MIR638-201ENST00000385237 100 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L2-201ENST00000561772 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.89■■□□□ 1.09
FAM228BP0C875 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.89■■□□□ 1.09
FAM228BP0C875 AP001160.3-201ENST00000601484 763 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L6-201ENST00000626483 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L1-201ENST00000627662 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L8-201ENST00000629013 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L3-201ENST00000630187 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L7-201ENST00000630678 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 DUX4L5-201ENST00000630834 1275 ntBASIC21.89■■□□□ 1.09
FAM228BP0C875 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
FAM228BP0C875 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.89■■□□□ 1.09
FAM228BP0C875 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
FAM228BP0C875 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FAM228BP0C875 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FAM228BP0C875 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FAM228BP0C875 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FAM228BP0C875 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.88■■□□□ 1.09
FAM228BP0C875 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.88■■□□□ 1.09
FAM228BP0C875 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FAM228BP0C875 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 AC120498.10-201ENST00000621827 505 ntBASIC21.88■■□□□ 1.09
FAM228BP0C875 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FAM228BP0C875 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.87■■□□□ 1.09
FAM228BP0C875 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.87■■□□□ 1.09
FAM228BP0C875 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.87■■□□□ 1.09
FAM228BP0C875 AC116050.2-201ENST00000612102 1779 ntBASIC21.87■■□□□ 1.09
FAM228BP0C875 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
FAM228BP0C875 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FAM228BP0C875 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FAM228BP0C875 TERF1P2-201ENST00000583350 1212 ntBASIC21.87■■□□□ 1.09
FAM228BP0C875 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FAM228BP0C875 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FAM228BP0C875 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
FAM228BP0C875 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.87■■□□□ 1.09
FAM228BP0C875 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.87■■□□□ 1.09
FAM228BP0C875 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FAM228BP0C875 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
FAM228BP0C875 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
FAM228BP0C875 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.86■■□□□ 1.09
FAM228BP0C875 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 MIR2861-201ENST00000636310 90 ntBASIC21.86■■□□□ 1.09
FAM228BP0C875 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FAM228BP0C875 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
FAM228BP0C875 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
FAM228BP0C875 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.85■■□□□ 1.09
FAM228BP0C875 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.85■■□□□ 1.09
FAM228BP0C875 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.85■■□□□ 1.09
FAM228BP0C875 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.85■■□□□ 1.09
FAM228BP0C875 AC123595.1-201ENST00000440769 1046 ntBASIC21.85■■□□□ 1.09
FAM228BP0C875 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.85■■□□□ 1.09
FAM228BP0C875 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FAM228BP0C875 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
FAM228BP0C875 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.84■■□□□ 1.09
FAM228BP0C875 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.84■■□□□ 1.09
FAM228BP0C875 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FAM228BP0C875 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms