Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.46■■□□□ 1.19
CHRNA1P02708 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CHRNA1P02708 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHRNA1P02708 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHRNA1P02708 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.45■■□□□ 1.18
CHRNA1P02708 MIR718-201ENST00000390190 70 ntBASIC22.45■■□□□ 1.18
CHRNA1P02708 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHRNA1P02708 AL356652.1-201ENST00000615962 565 ntBASIC22.45■■□□□ 1.18
CHRNA1P02708 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.45■■□□□ 1.18
CHRNA1P02708 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CHRNA1P02708 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHRNA1P02708 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.45■■□□□ 1.18
CHRNA1P02708 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHRNA1P02708 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.45■■□□□ 1.18
CHRNA1P02708 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CHRNA1P02708 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.45■■□□□ 1.18
CHRNA1P02708 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.45■■□□□ 1.18
CHRNA1P02708 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHRNA1P02708 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.44■■□□□ 1.18
CHRNA1P02708 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.44■■□□□ 1.18
CHRNA1P02708 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.44■■□□□ 1.18
CHRNA1P02708 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.44■■□□□ 1.18
CHRNA1P02708 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
CHRNA1P02708 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.44■■□□□ 1.18
CHRNA1P02708 MTDHP1-201ENST00000605323 784 ntBASIC22.44■■□□□ 1.18
CHRNA1P02708 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.44■■□□□ 1.18
CHRNA1P02708 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHRNA1P02708 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.43■■□□□ 1.18
CHRNA1P02708 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.43■■□□□ 1.18
CHRNA1P02708 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.43■■□□□ 1.18
CHRNA1P02708 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.43■■□□□ 1.18
CHRNA1P02708 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.43■■□□□ 1.18
CHRNA1P02708 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.43■■□□□ 1.18
CHRNA1P02708 PGM5P4-201ENST00000421970 445 ntBASIC22.43■■□□□ 1.18
CHRNA1P02708 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.43■■□□□ 1.18
CHRNA1P02708 AC005829.2-201ENST00000571422 1056 ntBASIC22.43■■□□□ 1.18
CHRNA1P02708 MIR4497-201ENST00000583208 89 ntBASIC22.43■■□□□ 1.18
CHRNA1P02708 AC120498.8-201ENST00000614275 531 ntBASIC22.43■■□□□ 1.18
CHRNA1P02708 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.43■■□□□ 1.18
CHRNA1P02708 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.43■■□□□ 1.18
CHRNA1P02708 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHRNA1P02708 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CHRNA1P02708 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CHRNA1P02708 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.42■■□□□ 1.18
CHRNA1P02708 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.42■■□□□ 1.18
CHRNA1P02708 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CHRNA1P02708 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.42■■□□□ 1.18
CHRNA1P02708 AC006557.6-201ENST00000623071 864 ntBASIC22.42■■□□□ 1.18
CHRNA1P02708 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHRNA1P02708 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CHRNA1P02708 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CHRNA1P02708 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.41■■□□□ 1.18
CHRNA1P02708 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRNA1P02708 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CHRNA1P02708 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHRNA1P02708 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CHRNA1P02708 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHRNA1P02708 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHRNA1P02708 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHRNA1P02708 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
CHRNA1P02708 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms