Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 AC120498.10-201ENST00000621827 505 ntBASIC18.38■□□□□ 0.53
HLA-DQA2P01906 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQA2P01906 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 AC007225.1-201ENST00000566331 1836 ntBASIC18.37■□□□□ 0.53
HLA-DQA2P01906 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 AC073314.1-201ENST00000568729 2216 ntBASIC18.37■□□□□ 0.53
HLA-DQA2P01906 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQA2P01906 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQA2P01906 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.35■□□□□ 0.53
HLA-DQA2P01906 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 LINC02228-203ENST00000641970 1355 ntBASIC18.35■□□□□ 0.53
HLA-DQA2P01906 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 AP005212.1-201ENST00000581547 1997 ntBASIC18.35■□□□□ 0.53
HLA-DQA2P01906 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 GABARAPL3-202ENST00000624044 1851 ntBASIC18.35■□□□□ 0.53
HLA-DQA2P01906 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA2P01906 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 AC011484.1-201ENST00000377652 1995 ntBASIC18.34■□□□□ 0.53
HLA-DQA2P01906 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 AC027612.3-201ENST00000413684 1047 ntBASIC18.34■□□□□ 0.53
HLA-DQA2P01906 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA2P01906 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms