Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 CYP2D8P-201ENST00000433633 1490 ntBASIC20.83■□□□□ 0.93
PDGFBP01127 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.83■□□□□ 0.93
PDGFBP01127 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.83■□□□□ 0.93
PDGFBP01127 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFBP01127 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFBP01127 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.83■□□□□ 0.93
PDGFBP01127 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.83■□□□□ 0.92
PDGFBP01127 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.83■□□□□ 0.92
PDGFBP01127 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.82■□□□□ 0.92
PDGFBP01127 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 AL390955.1-201ENST00000428694 934 ntBASIC20.82■□□□□ 0.92
PDGFBP01127 WWOX-216ENST00000569818 525 ntBASIC20.82■□□□□ 0.92
PDGFBP01127 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.82■□□□□ 0.92
PDGFBP01127 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFBP01127 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFBP01127 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFBP01127 AC026471.6-201ENST00000622954 1905 ntBASIC20.81■□□□□ 0.92
PDGFBP01127 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDGFBP01127 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDGFBP01127 AL390719.1-204ENST00000412397 1219 ntBASIC20.81■□□□□ 0.92
PDGFBP01127 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
PDGFBP01127 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PDGFBP01127 REXO1L10P-201ENST00000615707 1290 ntBASIC20.81■□□□□ 0.92
PDGFBP01127 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.81■□□□□ 0.92
PDGFBP01127 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.81■□□□□ 0.92
PDGFBP01127 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFBP01127 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
PDGFBP01127 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.8■□□□□ 0.92
PDGFBP01127 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.8■□□□□ 0.92
PDGFBP01127 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.8■□□□□ 0.92
PDGFBP01127 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDGFBP01127 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFBP01127 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.79■□□□□ 0.92
PDGFBP01127 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PDGFBP01127 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 UNC93B2-201ENST00000285383 730 ntBASIC20.79■□□□□ 0.92
PDGFBP01127 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.79■□□□□ 0.92
PDGFBP01127 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.79■□□□□ 0.92
PDGFBP01127 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.79■□□□□ 0.92
PDGFBP01127 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.79■□□□□ 0.92
PDGFBP01127 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 AL031963.3-201ENST00000606441 850 ntBASIC20.79■□□□□ 0.92
PDGFBP01127 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFBP01127 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDGFBP01127 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDGFBP01127 SLC25A3P1-201ENST00000443844 931 ntBASIC20.78■□□□□ 0.92
PDGFBP01127 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.78■□□□□ 0.92
PDGFBP01127 NUDT16P1-203ENST00000513809 620 ntBASIC20.78■□□□□ 0.92
PDGFBP01127 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.78■□□□□ 0.92
PDGFBP01127 AC010947.1-201ENST00000623454 693 ntBASIC20.78■□□□□ 0.92
PDGFBP01127 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFBP01127 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.78■□□□□ 0.92
PDGFBP01127 AC092053.2-201ENST00000640557 1818 ntBASIC20.78■□□□□ 0.92
PDGFBP01127 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFBP01127 KRT18P22-201ENST00000402024 1347 ntBASIC20.78■□□□□ 0.92
PDGFBP01127 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFBP01127 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms