Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CPNE6O95741 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.11■□□□□ 0.81
CPNE6O95741 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE6O95741 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE6O95741 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CPNE6O95741 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CPNE6O95741 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 AC026471.6-201ENST00000622954 1905 ntBASIC20.1■□□□□ 0.81
CPNE6O95741 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPNE6O95741 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPNE6O95741 DUSP5P2-201ENST00000426873 1033 ntBASIC20.1■□□□□ 0.81
CPNE6O95741 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CPNE6O95741 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE6O95741 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE6O95741 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.1■□□□□ 0.81
CPNE6O95741 ITM2C-210ENST00000620962 501 ntBASIC20.1■□□□□ 0.81
CPNE6O95741 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE6O95741 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CPNE6O95741 AL157384.1-201ENST00000445995 2473 ntBASIC20.1■□□□□ 0.81
CPNE6O95741 RNF165-205ENST00000588679 2904 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 KRT18P29-201ENST00000397031 1267 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 AC091799.1-201ENST00000422823 811 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.09■□□□□ 0.81
CPNE6O95741 CDV3P1-201ENST00000471403 739 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE6O95741 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.09■□□□□ 0.81
CPNE6O95741 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE6O95741 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.09■□□□□ 0.81
CPNE6O95741 FAM21FP-204ENST00000608637 956 ntBASIC20.09■□□□□ 0.81
CPNE6O95741 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.09■□□□□ 0.81
CPNE6O95741 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE6O95741 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE6O95741 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPNE6O95741 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE6O95741 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 LSM12P1-201ENST00000411836 588 ntBASIC20.08■□□□□ 0.81
CPNE6O95741 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE6O95741 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE6O95741 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPNE6O95741 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CPNE6O95741 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.08■□□□□ 0.81
CPNE6O95741 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.8
CPNE6O95741 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CPNE6O95741 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CPNE6O95741 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CPNE6O95741 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CPNE6O95741 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.08■□□□□ 0.8
CPNE6O95741 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE6O95741 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CPNE6O95741 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE6O95741 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE6O95741 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE6O95741 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE6O95741 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE6O95741 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE6O95741 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE6O95741 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE6O95741 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE6O95741 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CPNE6O95741 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CPNE6O95741 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE6O95741 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms