Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.73■□□□□ 0.27
SCAF4O95104 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.73■□□□□ 0.27
SCAF4O95104 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCAF4O95104 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCAF4O95104 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCAF4O95104 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SCAF4O95104 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SCAF4O95104 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 AC073314.1-201ENST00000568729 2216 ntBASIC16.72■□□□□ 0.27
SCAF4O95104 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
SCAF4O95104 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.72■□□□□ 0.27
SCAF4O95104 MIR4767-201ENST00000582827 78 ntBASIC16.72■□□□□ 0.27
SCAF4O95104 AL138724.1-201ENST00000606771 1088 ntBASIC16.72■□□□□ 0.27
SCAF4O95104 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SCAF4O95104 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCAF4O95104 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.72■□□□□ 0.27
SCAF4O95104 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAF4O95104 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.71■□□□□ 0.27
SCAF4O95104 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAF4O95104 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAF4O95104 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAF4O95104 AC011298.3-201ENST00000615796 283 ntBASIC16.71■□□□□ 0.27
SCAF4O95104 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAF4O95104 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAF4O95104 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAF4O95104 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAF4O95104 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SCAF4O95104 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAF4O95104 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAF4O95104 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAF4O95104 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SCAF4O95104 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAF4O95104 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.69■□□□□ 0.26
SCAF4O95104 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.69■□□□□ 0.26
SCAF4O95104 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.69■□□□□ 0.26
SCAF4O95104 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.69■□□□□ 0.26
SCAF4O95104 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms