Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.5■□□□□ 0.87
GPC4O75487 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.5■□□□□ 0.87
GPC4O75487 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.5■□□□□ 0.87
GPC4O75487 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.5■□□□□ 0.87
GPC4O75487 AC120498.10-201ENST00000621827 505 ntBASIC20.5■□□□□ 0.87
GPC4O75487 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GPC4O75487 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GPC4O75487 LINC01006-201ENST00000333319 2292 ntBASIC20.5■□□□□ 0.87
GPC4O75487 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GPC4O75487 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.49■□□□□ 0.87
GPC4O75487 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.49■□□□□ 0.87
GPC4O75487 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GPC4O75487 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GPC4O75487 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
GPC4O75487 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GPC4O75487 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.48■□□□□ 0.87
GPC4O75487 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GPC4O75487 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GPC4O75487 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.48■□□□□ 0.87
GPC4O75487 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GPC4O75487 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.47■□□□□ 0.87
GPC4O75487 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.47■□□□□ 0.87
GPC4O75487 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.47■□□□□ 0.87
GPC4O75487 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.47■□□□□ 0.87
GPC4O75487 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.47■□□□□ 0.87
GPC4O75487 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.47■□□□□ 0.87
GPC4O75487 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.47■□□□□ 0.87
GPC4O75487 UBE2DNL-204ENST00000602536 740 ntBASIC20.47■□□□□ 0.87
GPC4O75487 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GPC4O75487 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
GPC4O75487 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.47■□□□□ 0.87
GPC4O75487 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
GPC4O75487 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GPC4O75487 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.46■□□□□ 0.87
GPC4O75487 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.46■□□□□ 0.87
GPC4O75487 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.46■□□□□ 0.87
GPC4O75487 AC137761.2-201ENST00000561729 223 ntBASIC20.46■□□□□ 0.87
GPC4O75487 AC145350.3-201ENST00000569033 163 ntBASIC20.46■□□□□ 0.87
GPC4O75487 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.46■□□□□ 0.87
GPC4O75487 AC022517.1-201ENST00000592429 346 ntBASIC20.46■□□□□ 0.87
GPC4O75487 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GPC4O75487 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
GPC4O75487 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
GPC4O75487 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GPC4O75487 AC006015.1-201ENST00000429970 570 ntBASIC20.45■□□□□ 0.86
GPC4O75487 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.45■□□□□ 0.86
GPC4O75487 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.45■□□□□ 0.86
GPC4O75487 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.45■□□□□ 0.86
GPC4O75487 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.45■□□□□ 0.86
GPC4O75487 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.45■□□□□ 0.86
GPC4O75487 RARRES2P11-201ENST00000635158 484 ntBASIC20.45■□□□□ 0.86
GPC4O75487 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GPC4O75487 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GPC4O75487 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms