Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CLDN5-201ENST00000403084 2357 ntBASIC20.88■□□□□ 0.93
KDELR3O43731 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
KDELR3O43731 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KDELR3O43731 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDELR3O43731 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
KDELR3O43731 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.88■□□□□ 0.93
KDELR3O43731 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KDELR3O43731 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
KDELR3O43731 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.87■□□□□ 0.93
KDELR3O43731 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.87■□□□□ 0.93
KDELR3O43731 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.87■□□□□ 0.93
KDELR3O43731 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 PGM5P4-201ENST00000421970 445 ntBASIC20.87■□□□□ 0.93
KDELR3O43731 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.87■□□□□ 0.93
KDELR3O43731 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
KDELR3O43731 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KDELR3O43731 KRT17P1-201ENST00000399211 1546 ntBASIC20.87■□□□□ 0.93
KDELR3O43731 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
KDELR3O43731 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.87■□□□□ 0.93
KDELR3O43731 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDELR3O43731 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KDELR3O43731 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 AL355802.2-201ENST00000402069 882 ntBASIC20.86■□□□□ 0.93
KDELR3O43731 LSM12P1-201ENST00000411836 588 ntBASIC20.86■□□□□ 0.93
KDELR3O43731 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.86■□□□□ 0.93
KDELR3O43731 MIR4758-201ENST00000577688 71 ntBASIC20.86■□□□□ 0.93
KDELR3O43731 AC092118.2-201ENST00000613495 667 ntBASIC20.86■□□□□ 0.93
KDELR3O43731 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.86■□□□□ 0.93
KDELR3O43731 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
KDELR3O43731 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDELR3O43731 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KDELR3O43731 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KDELR3O43731 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.85■□□□□ 0.93
KDELR3O43731 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.85■□□□□ 0.93
KDELR3O43731 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KDELR3O43731 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.85■□□□□ 0.93
KDELR3O43731 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.85■□□□□ 0.93
KDELR3O43731 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.85■□□□□ 0.93
KDELR3O43731 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.85■□□□□ 0.93
KDELR3O43731 AL589743.5-201ENST00000616611 1050 ntBASIC20.85■□□□□ 0.93
KDELR3O43731 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDELR3O43731 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KDELR3O43731 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KDELR3O43731 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.84■□□□□ 0.93
KDELR3O43731 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KDELR3O43731 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KDELR3O43731 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KDELR3O43731 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
KDELR3O43731 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KDELR3O43731 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.84■□□□□ 0.93
KDELR3O43731 AL356652.1-201ENST00000615962 565 ntBASIC20.84■□□□□ 0.93
KDELR3O43731 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.84■□□□□ 0.93
KDELR3O43731 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
KDELR3O43731 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KDELR3O43731 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
KDELR3O43731 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KDELR3O43731 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
KDELR3O43731 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KDELR3O43731 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.83■□□□□ 0.93
KDELR3O43731 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KDELR3O43731 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.83■□□□□ 0.93
KDELR3O43731 AC073210.2-201ENST00000430369 194 ntBASIC20.83■□□□□ 0.93
KDELR3O43731 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.83■□□□□ 0.93
KDELR3O43731 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KDELR3O43731 AC105020.6-201ENST00000621523 1217 ntBASIC20.83■□□□□ 0.93
KDELR3O43731 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.83■□□□□ 0.93
KDELR3O43731 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.83■□□□□ 0.93
KDELR3O43731 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
KDELR3O43731 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.83■□□□□ 0.92
KDELR3O43731 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms