Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 MIR4758-201ENST00000577688 71 ntBASIC21.34■■□□□ 1.01
MSI1O43347 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.34■■□□□ 1.01
MSI1O43347 AC092118.2-201ENST00000613495 667 ntBASIC21.34■■□□□ 1.01
MSI1O43347 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSI1O43347 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.33■■□□□ 1.01
MSI1O43347 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.33■■□□□ 1.01
MSI1O43347 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
MSI1O43347 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSI1O43347 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.33■■□□□ 1.01
MSI1O43347 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.33■■□□□ 1.01
MSI1O43347 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
MSI1O43347 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.33■■□□□ 1.01
MSI1O43347 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
MSI1O43347 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSI1O43347 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSI1O43347 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.33■■□□□ 1
MSI1O43347 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSI1O43347 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.33■■□□□ 1
MSI1O43347 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.32■■□□□ 1
MSI1O43347 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.32■■□□□ 1
MSI1O43347 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
MSI1O43347 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
MSI1O43347 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 LSM12P1-201ENST00000411836 588 ntBASIC21.32■■□□□ 1
MSI1O43347 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.32■■□□□ 1
MSI1O43347 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.32■■□□□ 1
MSI1O43347 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.32■■□□□ 1
MSI1O43347 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.32■■□□□ 1
MSI1O43347 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.32■■□□□ 1
MSI1O43347 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MSI1O43347 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
MSI1O43347 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.32■■□□□ 1
MSI1O43347 AC133041.1-202ENST00000642053 222 ntBASIC21.32■■□□□ 1
MSI1O43347 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.32■■□□□ 1
MSI1O43347 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.32■■□□□ 1
MSI1O43347 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.31■■□□□ 1
MSI1O43347 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.31■■□□□ 1
MSI1O43347 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.31■■□□□ 1
MSI1O43347 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MSI1O43347 KRT18P68-201ENST00000392293 1000 ntBASIC21.31■■□□□ 1
MSI1O43347 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
MSI1O43347 DUSP5P2-201ENST00000426873 1033 ntBASIC21.31■■□□□ 1
MSI1O43347 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.31■■□□□ 1
MSI1O43347 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.31■■□□□ 1
MSI1O43347 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
MSI1O43347 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.31■■□□□ 1
MSI1O43347 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.31■■□□□ 1
MSI1O43347 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
MSI1O43347 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.3■■□□□ 1
MSI1O43347 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.3■■□□□ 1
MSI1O43347 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.3■■□□□ 1
MSI1O43347 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSI1O43347 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.3■■□□□ 1
MSI1O43347 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.3■■□□□ 1
MSI1O43347 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.29■■□□□ 1
MSI1O43347 AC087633.2-202ENST00000565166 1439 ntBASIC21.29■■□□□ 1
MSI1O43347 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.29■■□□□ 1
MSI1O43347 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MSI1O43347 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.29■■□□□ 1
MSI1O43347 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MSI1O43347 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.29■■□□□ 1
MSI1O43347 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSI1O43347 AC073210.2-201ENST00000430369 194 ntBASIC21.29■■□□□ 1
MSI1O43347 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
MSI1O43347 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.29■■□□□ 1
MSI1O43347 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.29■■□□□ 1
MSI1O43347 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms