Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 RAP2CP1-201ENST00000605103 478 ntBASIC18.58■□□□□ 0.56
SMAD9O15198 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.58■□□□□ 0.56
SMAD9O15198 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.58■□□□□ 0.56
SMAD9O15198 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SMAD9O15198 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 AC231657.2-201ENST00000624556 255 ntBASIC18.57■□□□□ 0.56
SMAD9O15198 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMAD9O15198 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.57■□□□□ 0.56
SMAD9O15198 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SMAD9O15198 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD9O15198 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMAD9O15198 AF106564.1-201ENST00000607058 2553 ntBASIC18.56■□□□□ 0.56
SMAD9O15198 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 AC007322.4-201ENST00000509611 723 ntBASIC18.56■□□□□ 0.56
SMAD9O15198 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.56■□□□□ 0.56
SMAD9O15198 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.56■□□□□ 0.56
SMAD9O15198 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SMAD9O15198 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMAD9O15198 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.55■□□□□ 0.56
SMAD9O15198 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMAD9O15198 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMAD9O15198 AL049796.1-201ENST00000565336 1766 ntBASIC18.55■□□□□ 0.56
SMAD9O15198 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SMAD9O15198 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMAD9O15198 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
SMAD9O15198 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMAD9O15198 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMAD9O15198 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMAD9O15198 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SMAD9O15198 AC091799.1-201ENST00000422823 811 ntBASIC18.55■□□□□ 0.56
SMAD9O15198 AC007322.1-201ENST00000426983 750 ntBASIC18.55■□□□□ 0.56
SMAD9O15198 AC026185.1-201ENST00000445748 174 ntBASIC18.55■□□□□ 0.56
SMAD9O15198 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.55■□□□□ 0.56
SMAD9O15198 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMAD9O15198 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.55■□□□□ 0.56
SMAD9O15198 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
SMAD9O15198 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
SMAD9O15198 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SMAD9O15198 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMAD9O15198 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMAD9O15198 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
SMAD9O15198 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SMAD9O15198 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SMAD9O15198 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMAD9O15198 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.54■□□□□ 0.56
SMAD9O15198 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMAD9O15198 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMAD9O15198 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.54■□□□□ 0.56
SMAD9O15198 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.54■□□□□ 0.56
SMAD9O15198 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.53■□□□□ 0.56
SMAD9O15198 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.53■□□□□ 0.56
SMAD9O15198 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.53■□□□□ 0.56
SMAD9O15198 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SMAD9O15198 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms