Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.57■■□□□ 1.36
ATP2A1O14983 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATP2A1O14983 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.57■■□□□ 1.36
ATP2A1O14983 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.57■■□□□ 1.36
ATP2A1O14983 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.57■■□□□ 1.36
ATP2A1O14983 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.57■■□□□ 1.36
ATP2A1O14983 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.57■■□□□ 1.36
ATP2A1O14983 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATP2A1O14983 SOX15-203ENST00000570788 1093 ntBASIC23.57■■□□□ 1.36
ATP2A1O14983 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.57■■□□□ 1.36
ATP2A1O14983 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.57■■□□□ 1.36
ATP2A1O14983 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.57■■□□□ 1.36
ATP2A1O14983 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ATP2A1O14983 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ATP2A1O14983 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
ATP2A1O14983 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.56■■□□□ 1.36
ATP2A1O14983 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
ATP2A1O14983 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.56■■□□□ 1.36
ATP2A1O14983 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.56■■□□□ 1.36
ATP2A1O14983 UBE2SP1-201ENST00000450587 669 ntBASIC23.56■■□□□ 1.36
ATP2A1O14983 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.56■■□□□ 1.36
ATP2A1O14983 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ATP2A1O14983 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.56■■□□□ 1.36
ATP2A1O14983 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 RN7SL471P-201ENST00000580476 299 ntBASIC23.56■■□□□ 1.36
ATP2A1O14983 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ATP2A1O14983 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
ATP2A1O14983 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.55■■□□□ 1.36
ATP2A1O14983 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.55■■□□□ 1.36
ATP2A1O14983 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.55■■□□□ 1.36
ATP2A1O14983 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
ATP2A1O14983 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.55■■□□□ 1.36
ATP2A1O14983 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.55■■□□□ 1.36
ATP2A1O14983 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATP2A1O14983 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ATP2A1O14983 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
ATP2A1O14983 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP2A1O14983 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.54■■□□□ 1.36
ATP2A1O14983 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.54■■□□□ 1.36
ATP2A1O14983 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
ATP2A1O14983 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP2A1O14983 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.53■■□□□ 1.36
ATP2A1O14983 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
ATP2A1O14983 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 RPPH1-201ENST00000516869 333 ntBASIC23.53■■□□□ 1.36
ATP2A1O14983 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP2A1O14983 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.53■■□□□ 1.36
ATP2A1O14983 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.53■■□□□ 1.36
ATP2A1O14983 AC069544.1-201ENST00000609399 999 ntBASIC23.53■■□□□ 1.36
ATP2A1O14983 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ATP2A1O14983 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP2A1O14983 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.53■■□□□ 1.36
ATP2A1O14983 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 POM121L13P-201ENST00000422362 380 ntBASIC23.52■■□□□ 1.36
ATP2A1O14983 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.52■■□□□ 1.36
ATP2A1O14983 RPS2P4-201ENST00000476944 856 ntBASIC23.52■■□□□ 1.36
ATP2A1O14983 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP2A1O14983 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.52■■□□□ 1.36
ATP2A1O14983 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.52■■□□□ 1.36
ATP2A1O14983 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.52■■□□□ 1.36
ATP2A1O14983 AL356652.1-201ENST00000615962 565 ntBASIC23.52■■□□□ 1.36
ATP2A1O14983 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP2A1O14983 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP2A1O14983 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ATP2A1O14983 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP2A1O14983 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms