Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.25■□□□□ 0.83
IFRD1O00458 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.25■□□□□ 0.83
IFRD1O00458 AC008694.1-202ENST00000636953 945 ntBASIC20.25■□□□□ 0.83
IFRD1O00458 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.25■□□□□ 0.83
IFRD1O00458 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
IFRD1O00458 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IFRD1O00458 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
IFRD1O00458 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
IFRD1O00458 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFRD1O00458 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
IFRD1O00458 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.24■□□□□ 0.83
IFRD1O00458 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
IFRD1O00458 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.24■□□□□ 0.83
IFRD1O00458 AL162412.1-201ENST00000567129 965 ntBASIC20.24■□□□□ 0.83
IFRD1O00458 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 AC068338.2-201ENST00000563278 1430 ntBASIC20.24■□□□□ 0.83
IFRD1O00458 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFRD1O00458 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
IFRD1O00458 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.24■□□□□ 0.83
IFRD1O00458 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
IFRD1O00458 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.23■□□□□ 0.83
IFRD1O00458 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 AC073130.3-201ENST00000624389 2278 ntBASIC20.23■□□□□ 0.83
IFRD1O00458 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.23■□□□□ 0.83
IFRD1O00458 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
IFRD1O00458 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
IFRD1O00458 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.23■□□□□ 0.83
IFRD1O00458 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFRD1O00458 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.23■□□□□ 0.83
IFRD1O00458 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
IFRD1O00458 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
IFRD1O00458 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
IFRD1O00458 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.22■□□□□ 0.83
IFRD1O00458 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 AC116050.2-201ENST00000612102 1779 ntBASIC20.22■□□□□ 0.83
IFRD1O00458 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 CYP2T1P-201ENST00000432607 1285 ntBASIC20.22■□□□□ 0.83
IFRD1O00458 CROCCP5-201ENST00000436658 830 ntBASIC20.22■□□□□ 0.83
IFRD1O00458 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.22■□□□□ 0.83
IFRD1O00458 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.22■□□□□ 0.83
IFRD1O00458 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.22■□□□□ 0.83
IFRD1O00458 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFRD1O00458 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IFRD1O00458 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
IFRD1O00458 AC007322.3-201ENST00000426526 701 ntBASIC20.21■□□□□ 0.83
IFRD1O00458 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.21■□□□□ 0.83
IFRD1O00458 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.21■□□□□ 0.83
IFRD1O00458 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFRD1O00458 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.21■□□□□ 0.83
IFRD1O00458 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.21■□□□□ 0.83
IFRD1O00458 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
IFRD1O00458 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFRD1O00458 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFRD1O00458 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.2■□□□□ 0.82
IFRD1O00458 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms