Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 BX842568.3-201ENST00000418104 571 ntBASIC19.47■□□□□ 0.71
PDLIM1O00151 AF213884.3-201ENST00000563833 479 ntBASIC19.47■□□□□ 0.71
PDLIM1O00151 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PDLIM1O00151 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM1O00151 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PDLIM1O00151 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM1O00151 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 AL512408.1-201ENST00000569378 2000 ntBASIC19.46■□□□□ 0.71
PDLIM1O00151 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM1O00151 AC142381.2-201ENST00000566120 298 ntBASIC19.46■□□□□ 0.71
PDLIM1O00151 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.46■□□□□ 0.71
PDLIM1O00151 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.46■□□□□ 0.71
PDLIM1O00151 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDLIM1O00151 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM1O00151 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.46■□□□□ 0.71
PDLIM1O00151 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM1O00151 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM1O00151 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM1O00151 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
PDLIM1O00151 SLC47A1P1-202ENST00000449666 945 ntBASIC19.45■□□□□ 0.7
PDLIM1O00151 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.45■□□□□ 0.7
PDLIM1O00151 AC027682.1-201ENST00000562846 899 ntBASIC19.45■□□□□ 0.7
PDLIM1O00151 AC233992.3-201ENST00000607491 485 ntBASIC19.45■□□□□ 0.7
PDLIM1O00151 AC007225.1-201ENST00000566331 1836 ntBASIC19.45■□□□□ 0.7
PDLIM1O00151 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM1O00151 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM1O00151 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM1O00151 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM1O00151 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM1O00151 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 AC091305.1-201ENST00000479476 895 ntBASIC19.44■□□□□ 0.7
PDLIM1O00151 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.44■□□□□ 0.7
PDLIM1O00151 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 AC019069.1-201ENST00000610008 1333 ntBASIC19.44■□□□□ 0.7
PDLIM1O00151 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM1O00151 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM1O00151 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 RASA4CP-201ENST00000424092 1398 ntBASIC19.44■□□□□ 0.7
PDLIM1O00151 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms