Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 AL391422.3-201ENST00000603791 2761 ntBASIC16.52■□□□□ 0.24
SRRM4A7MD48 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SRRM4A7MD48 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM4A7MD48 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM4A7MD48 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 KRT19P1-201ENST00000405746 1186 ntBASIC16.51■□□□□ 0.23
SRRM4A7MD48 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 SLC7A5P1-201ENST00000568957 537 ntBASIC16.51■□□□□ 0.23
SRRM4A7MD48 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM4A7MD48 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM4A7MD48 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 AC019069.1-201ENST00000610008 1333 ntBASIC16.5■□□□□ 0.23
SRRM4A7MD48 AL512408.1-201ENST00000569378 2000 ntBASIC16.5■□□□□ 0.23
SRRM4A7MD48 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 AC091799.1-201ENST00000422823 811 ntBASIC16.5■□□□□ 0.23
SRRM4A7MD48 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 RBM17P2-201ENST00000616397 1405 ntBASIC16.5■□□□□ 0.23
SRRM4A7MD48 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM4A7MD48 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM4A7MD48 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 AC097381.1-201ENST00000429019 1296 ntBASIC16.49■□□□□ 0.23
SRRM4A7MD48 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.49■□□□□ 0.23
SRRM4A7MD48 AC243732.1-201ENST00000612648 864 ntBASIC16.49■□□□□ 0.23
SRRM4A7MD48 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRRM4A7MD48 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 PCDHAC2-203ENST00000615316 3011 ntBASIC16.48■□□□□ 0.23
SRRM4A7MD48 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.48■□□□□ 0.23
SRRM4A7MD48 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRRM4A7MD48 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms