Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L2-201ENST00000561772 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 AP001160.3-201ENST00000601484 763 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L6-201ENST00000626483 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L1-201ENST00000627662 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L8-201ENST00000629013 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L3-201ENST00000630187 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L7-201ENST00000630678 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 DUX4L5-201ENST00000630834 1275 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 AC020907.5-201ENST00000624372 1936 ntBASIC16.39■□□□□ 0.21
CGB1A6NKQ9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 KRT18P14-201ENST00000534205 1250 ntBASIC16.38■□□□□ 0.21
CGB1A6NKQ9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CGB1A6NKQ9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 AC004854.2-201ENST00000608450 1441 ntBASIC16.37■□□□□ 0.21
CGB1A6NKQ9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 KRT18P61-201ENST00000585825 1298 ntBASIC16.37■□□□□ 0.21
CGB1A6NKQ9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CGB1A6NKQ9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CGB1A6NKQ9 AL121603.2-201ENST00000557373 2117 ntBASIC16.36■□□□□ 0.21
CGB1A6NKQ9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms