Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RBFOX3A6NFN3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.18■□□□□ 0.18
RBFOX3A6NFN3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms