Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC006128.1-201ENST00000624704 1661 ntBASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC012414.1-201ENST00000556676 535 ntBASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF103-CHMP3A0A140T963 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF103-CHMP3A0A140T963 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC142381.2-201ENST00000566120 298 ntBASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 AL354811.1-201ENST00000610286 706 ntBASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF103-CHMP3A0A140T963 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms