Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV25A0A0B4J276 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CYP21A1P-202ENST00000354927 1481 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 MIR4758-201ENST00000577688 71 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CYP2T3P-201ENST00000601990 817 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AC104771.1-201ENST00000603335 964 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AL589743.5-201ENST00000616611 1050 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AC026310.3-201ENST00000625186 2373 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AC138932.1-201ENST00000534164 6830 ntBASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV25A0A0B4J276 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 KRT18P68-201ENST00000392293 1000 ntBASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 HLA-L-209ENST00000420110 1011 ntBASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 AC093787.1-201ENST00000450396 207 ntBASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 AC087633.2-202ENST00000565166 1439 ntBASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV25A0A0B4J276 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 AC027702.1-201ENST00000563810 1770 ntBASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 LSM12P1-201ENST00000411836 588 ntBASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 AC073210.2-201ENST00000430369 194 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms