Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 AC011484.1-201ENST00000377652 1995 ntBASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 ZNRF2P3-201ENST00000424200 374 ntBASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV4A0A0B4J268 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 RARRES2P11-201ENST00000635158 484 ntBASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV4A0A0B4J268 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 LINC01521-201ENST00000504184 1943 ntBASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 KRT19P1-201ENST00000405746 1186 ntBASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms