Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-2A0A0B4J237 AC020907.5-201ENST00000624372 1936 ntBASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 AC010141.2-201ENST00000452426 721 ntBASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-2A0A0B4J237 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 KRT16P2-201ENST00000414673 1423 ntBASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-2A0A0B4J237 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-2A0A0B4J237 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 AC104187.1-201ENST00000607510 612 ntBASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-2A0A0B4J237 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-2A0A0B4J237 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms