Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC009237.3-201ENST00000393279 1427 ntBASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-1A0A0A6YYK1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC133561.4-201ENST00000566112 224 ntBASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC011484.1-201ENST00000377652 1995 ntBASIC15.55■□□□□ 0.08
TRAV8-1A0A0A6YYK1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-1A0A0A6YYK1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 BX842568.3-201ENST00000418104 571 ntBASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AL356441.2-201ENST00000443009 864 ntBASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC131281.2-201ENST00000520478 145 ntBASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms