Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
P04436 SNORA48.6-201ENST00000391156 130 ntBASIC8.37□□□□□ -1.07
P04436 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC8.37□□□□□ -1.07
P04436 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
P04436 AL031777.1-201ENST00000405418 499 ntBASIC8.37□□□□□ -1.07
P04436 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.37□□□□□ -1.07
P04436 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.37□□□□□ -1.07
P04436 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC8.37□□□□□ -1.07
P04436 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.37□□□□□ -1.07
P04436 AC005588.1-201ENST00000439168 162 ntBASIC8.37□□□□□ -1.07
P04436 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 MICC-201ENST00000445710 1055 ntBASIC8.37□□□□□ -1.07
P04436 AC073583.1-201ENST00000447553 400 ntBASIC8.37□□□□□ -1.07
P04436 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 GRPEL2P3-201ENST00000448626 640 ntBASIC8.37□□□□□ -1.07
P04436 POLR2CP1-201ENST00000453699 765 ntBASIC8.37□□□□□ -1.07
P04436 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 ENPP7P1-201ENST00000509557 999 ntBASIC8.37□□□□□ -1.07
P04436 RBM48P1-201ENST00000509661 1102 ntBASIC8.37□□□□□ -1.07
P04436 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 AC011726.1-201ENST00000515686 669 ntBASIC8.37□□□□□ -1.07
P04436 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC8.37□□□□□ -1.07
P04436 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC8.37□□□□□ -1.07
P04436 PGA4-202ENST00000537932 840 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 PGA3-204ENST00000538258 867 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 PGA3-207ENST00000543125 968 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 PGA4-206ENST00000544899 867 ntTSL 2 BASIC8.37□□□□□ -1.07
P04436 AL442663.4-201ENST00000555304 289 ntBASIC8.37□□□□□ -1.07
P04436 AC100843.3-201ENST00000591796 259 ntBASIC8.37□□□□□ -1.07
P04436 AC060766.4-201ENST00000592117 537 ntBASIC8.37□□□□□ -1.07
P04436 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 AC025518.2-201ENST00000605229 492 ntBASIC8.37□□□□□ -1.07
P04436 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.37□□□□□ -1.07
P04436 PKP4-218ENST00000629219 162 ntTSL 5 BASIC8.37□□□□□ -1.07
P04436 LINC00032-201ENST00000638495 1040 ntBASIC8.37□□□□□ -1.07
P04436 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 AL138831.3-201ENST00000623656 1458 ntBASIC8.37□□□□□ -1.07
P04436 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC8.37□□□□□ -1.07
P04436 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04436 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04436 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04436 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC8.37□□□□□ -1.07
P04436 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
P04436 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
P04436 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC8.36□□□□□ -1.07
P04436 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.36□□□□□ -1.07
P04436 AC007228.2-201ENST00000602145 1328 ntBASIC8.36□□□□□ -1.07
P04436 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.36□□□□□ -1.07
P04436 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
P04436 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 SNORD83A-201ENST00000386747 95 ntBASIC8.36□□□□□ -1.07
P04436 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
P04436 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.36□□□□□ -1.07
P04436 TRMT112P4-201ENST00000429016 379 ntBASIC8.36□□□□□ -1.07
P04436 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC8.36□□□□□ -1.07
P04436 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC8.36□□□□□ -1.07
P04436 AP000350.3-201ENST00000440099 289 ntBASIC8.36□□□□□ -1.07
P04436 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC8.36□□□□□ -1.07
P04436 RN7SL35P-201ENST00000466169 292 ntBASIC8.36□□□□□ -1.07
P04436 AC117382.1-201ENST00000468074 730 ntBASIC8.36□□□□□ -1.07
P04436 RN7SL236P-201ENST00000484759 284 ntBASIC8.36□□□□□ -1.07
P04436 AL590867.2-201ENST00000492974 447 ntBASIC8.36□□□□□ -1.07
P04436 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
P04436 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC8.36□□□□□ -1.07
P04436 AC022296.1-201ENST00000512176 682 ntBASIC8.36□□□□□ -1.07
P04436 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC8.36□□□□□ -1.07
P04436 AP000866.3-201ENST00000534607 433 ntBASIC8.36□□□□□ -1.07
P04436 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC8.36□□□□□ -1.07
P04436 AC015818.2-201ENST00000563569 840 ntBASIC8.36□□□□□ -1.07
P04436 AC044798.2-201ENST00000564222 1235 ntBASIC8.36□□□□□ -1.07
P04436 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC8.36□□□□□ -1.07
P04436 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC8.36□□□□□ -1.07
P04436 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
P04436 AC011416.3-201ENST00000603971 355 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms