Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC010768.3-201ENST00000525465 792 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 TRAV33-201ENST00000557514 338 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC9.61□□□□□ -0.87
SLC1A1P43005 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC9.61□□□□□ -0.87
SLC1A1P43005 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC9.61□□□□□ -0.87
SLC1A1P43005 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 AC119868.2-201ENST00000583991 432 ntTSL 3 BASIC9.61□□□□□ -0.87
SLC1A1P43005 AC018761.3-201ENST00000590065 388 ntTSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 BNIP3P15-201ENST00000604600 301 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC069503.1-202ENST00000616576 642 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 BX510359.8-201ENST00000617713 296 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC004241.4-201ENST00000622792 1120 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC247036.7-201ENST00000639643 304 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.61□□□□□ -0.87
SLC1A1P43005 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SLC1A1P43005 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 FAM149B1P1-201ENST00000533428 1610 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 OR3A4P-202ENST00000624752 1461 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 ZNF410-219ENST00000556797 1311 ntTSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 RNU1-120P-201ENST00000363009 157 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 RPS6-202ENST00000380381 892 ntTSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 RPS12P16-201ENST00000399739 407 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 AC012354.2-201ENST00000423051 461 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 OR13D2P-201ENST00000430667 907 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC9.6□□□□□ -0.87
SLC1A1P43005 AL096701.1-201ENST00000445477 457 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 AC106820.1-201ENST00000468708 420 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC9.6□□□□□ -0.87
SLC1A1P43005 GJA1P1-201ENST00000511478 1143 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 SNORA76.1-201ENST00000516313 135 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 TMED10P1-201ENST00000534816 655 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 AC005186.1-201ENST00000534849 570 ntTSL 4 BASIC9.6□□□□□ -0.87
SLC1A1P43005 AC068768.1-202ENST00000541002 1110 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC9.6□□□□□ -0.87
SLC1A1P43005 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 LGALS9DP-201ENST00000580112 764 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 RN7SL493P-201ENST00000580401 299 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 AP001357.2-201ENST00000586758 710 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC9.6□□□□□ -0.87
SLC1A1P43005 uc_338.24-201ENST00000617802 182 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC9.6□□□□□ -0.87
SLC1A1P43005 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 KNOP1P5-201ENST00000358374 1378 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 ANKRD20A5P-201ENST00000431648 3556 ntBASIC9.6□□□□□ -0.87
SLC1A1P43005 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SLC1A1P43005 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SLC1A1P43005 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 AL353583.1-201ENST00000624195 1855 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SLC1A1P43005 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC9.59□□□□□ -0.87
SLC1A1P43005 PADI4-202ENST00000375453 841 ntTSL 2 BASIC9.59□□□□□ -0.87
SLC1A1P43005 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SLC1A1P43005 RNA5SP207-201ENST00000390874 107 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AL353692.1-201ENST00000405081 755 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 RNA5SP29-201ENST00000410988 106 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AC018638.1-201ENST00000414464 330 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AL358781.2-201ENST00000415423 473 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC9.59□□□□□ -0.87
SLC1A1P43005 AC245884.3-201ENST00000445491 218 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 RFKP2-201ENST00000464555 477 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AF111169.1-201ENST00000469811 374 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 RN7SL482P-201ENST00000487928 298 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 AC073861.1-201ENST00000496294 459 ntBASIC9.59□□□□□ -0.87
SLC1A1P43005 PGAM1P1-201ENST00000504014 556 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms