Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC107613.1-201ENST00000450488 1018 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 UGT1A11P-201ENST00000456635 849 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AP003532.1-201ENST00000529936 310 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC044839.2-201ENST00000531982 534 ntTSL 3 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 WARSP1-201ENST00000533936 454 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC023906.5-201ENST00000558607 635 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 RPL17P3-201ENST00000605695 525 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 C5orf67-202ENST00000611197 354 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 OR7G15P-201ENST00000617262 333 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 STPG3-205ENST00000620243 1025 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC106872.12-201ENST00000622170 547 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC108125.1-201ENST00000622310 543 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AC105133.2-201ENST00000624158 461 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 AL157371.2-201ENST00000637813 480 ntTSL 4 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 EIF2D-201ENST00000271764 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CASP4-203ENST00000444739 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 IL22RA2-202ENST00000339602 2620 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RAF1P1-201ENST00000508566 1696 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL021937.1-201ENST00000420171 1558 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC244034.3-201ENST00000624347 3135 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 TXLNGY-203ENST00000445715 1915 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RMRP-202ENST00000363046 264 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC103563.8-201ENST00000415716 318 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC006195.1-201ENST00000423599 923 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RPSAP33-201ENST00000432315 865 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL009172.1-201ENST00000436365 1098 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL683842.1-201ENST00000455505 525 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ENPP7P4-201ENST00000487446 1086 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC090311.1-201ENST00000490739 249 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC233724.8-201ENST00000504574 234 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 TPT1P5-201ENST00000511433 521 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AP000867.1-201ENST00000511464 255 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC233724.3-201ENST00000512613 128 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RN7SKP52-201ENST00000516219 250 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 MIR3125-201ENST00000579927 78 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RN7SL557P-201ENST00000581047 286 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 MIR3918-201ENST00000581555 93 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC004840.2-201ENST00000603368 285 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL031710.2-201ENST00000621884 722 ntBASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 LINC01287-201ENST00000416982 2624 ntTSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NPIPA3F8WFD2 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
NPIPA3F8WFD2 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
NPIPA3F8WFD2 DNAAF4-204ENST00000457155 1567 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms