Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 RER1-204ENST00000378518 522 ntTSL 3 BASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 ECEL1P3-201ENST00000427961 737 ntBASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 AL049637.2-201ENST00000641778 930 ntBASIC34.63■■■■□ 3.13
BIVM-ERCC5R4GMW8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC34.62■■■■□ 3.13
BIVM-ERCC5R4GMW8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC242852.2-201ENST00000615738 1807 ntBASIC34.61■■■■□ 3.13
BIVM-ERCC5R4GMW8 C9orf163-202ENST00000624034 2573 ntBASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC113410.3-201ENST00000623366 203 ntBASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
BIVM-ERCC5R4GMW8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 AL355075.4-201ENST00000554988 638 ntBASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 LINC01023-201ENST00000606054 436 ntBASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 ABHD17AP6-201ENST00000458502 1044 ntBASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC34.59■■■■□ 3.13
BIVM-ERCC5R4GMW8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC34.58■■■■□ 3.13
BIVM-ERCC5R4GMW8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 KRASP1-201ENST00000407852 552 ntBASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 GOLGA2P6-201ENST00000340929 2049 ntBASIC34.57■■■■□ 3.12
BIVM-ERCC5R4GMW8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
BIVM-ERCC5R4GMW8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 AL023875.1-201ENST00000640777 796 ntBASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC34.55■■■■□ 3.12
BIVM-ERCC5R4GMW8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
BIVM-ERCC5R4GMW8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms