Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 AC026185.1-201ENST00000445748 174 ntBASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
DDX49Q9Y6V7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 AC079089.2-201ENST00000531211 1277 ntBASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.56■■□□□ 1.52
DDX49Q9Y6V7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 MFSD11-216ENST00000590393 1141 ntBASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
DDX49Q9Y6V7 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 AC104771.1-201ENST00000603335 964 ntBASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX49Q9Y6V7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 AL391422.3-201ENST00000603791 2761 ntBASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX49Q9Y6V7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 PCDHAC2-203ENST00000615316 3011 ntBASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 MIR663A-201ENST00000385250 93 ntBASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 AC055733.4-201ENST00000638462 1354 ntBASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX49Q9Y6V7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 KRT87P-202ENST00000534226 1464 ntBASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms