Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AF201337.1-201ENST00000520239 748 ntBASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 AC138907.5-202ENST00000569484 235 ntBASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA4Q9Y5G9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 AC073210.2-201ENST00000430369 194 ntBASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 AC093827.2-201ENST00000512654 315 ntBASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA4Q9Y5G9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 AC098934.4-201ENST00000564127 592 ntBASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 AC105036.2-201ENST00000569468 176 ntBASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA4Q9Y5G9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 CNN2P6-201ENST00000439038 900 ntBASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 AC010141.2-201ENST00000452426 721 ntBASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 AC133552.2-202ENST00000575694 574 ntBASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGA4Q9Y5G9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA4Q9Y5G9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms