Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB1Q9Y5F3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 RNA5SP413-201ENST00000516373 109 ntBASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB1Q9Y5F3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB1Q9Y5F3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 AC006128.1-201ENST00000624704 1661 ntBASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB1Q9Y5F3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
PCDHB1Q9Y5F3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB1Q9Y5F3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 PLK5-205ENST00000642079 1969 ntBASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHB1Q9Y5F3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 AC011484.1-201ENST00000377652 1995 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 KRT18P29-201ENST00000397031 1267 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 MIR4758-201ENST00000577688 71 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 AC243732.1-201ENST00000612648 864 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 ITM2C-210ENST00000620962 501 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 AC013268.1-206ENST00000638368 961 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 AC112229.1-201ENST00000639295 961 ntBASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB1Q9Y5F3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 MIPEPP3-201ENST00000412105 444 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms