Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTCBQ9Y3I0 FAM99A-202ENST00000538190 1989 ntBASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 RCN1P1-201ENST00000400413 996 ntBASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.16■■□□□ 1.78
RTCBQ9Y3I0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.15■■□□□ 1.78
RTCBQ9Y3I0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTCBQ9Y3I0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTCBQ9Y3I0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTCBQ9Y3I0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
RTCBQ9Y3I0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTCBQ9Y3I0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTCBQ9Y3I0 AC127496.7-201ENST00000625110 1798 ntBASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 AL390719.1-204ENST00000412397 1219 ntBASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
RTCBQ9Y3I0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 PGM5P4-201ENST00000421970 445 ntBASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RTCBQ9Y3I0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms