Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
SYNPO2Q9UMS6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
SYNPO2Q9UMS6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYNPO2Q9UMS6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 AL049796.1-201ENST00000565336 1766 ntBASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPO2Q9UMS6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 AC008687.6-201ENST00000596318 630 ntBASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPO2Q9UMS6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 AC027702.1-201ENST00000563810 1770 ntBASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 AC006058.3-201ENST00000606217 1069 ntBASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPO2Q9UMS6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 AC128676.1-201ENST00000454392 318 ntBASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPO2Q9UMS6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNPO2Q9UMS6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPO2Q9UMS6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNPO2Q9UMS6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms