Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 AL034346.1-201ENST00000568244 1277 ntBASIC17.65■□□□□ 0.42
RDH8Q9NYR8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MIR4466-201ENST00000606121 54 ntBASIC17.65■□□□□ 0.42
RDH8Q9NYR8 AC136469.2-201ENST00000623944 1028 ntBASIC17.65■□□□□ 0.42
RDH8Q9NYR8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RDH8Q9NYR8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RDH8Q9NYR8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 AC098818.2-201ENST00000564925 2320 ntBASIC17.64■□□□□ 0.41
RDH8Q9NYR8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 SMG8-203ENST00000578922 2178 ntBASIC17.64■□□□□ 0.41
RDH8Q9NYR8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
RDH8Q9NYR8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 AC011298.3-201ENST00000615796 283 ntBASIC17.63■□□□□ 0.41
RDH8Q9NYR8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RDH8Q9NYR8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 AP004607.7-201ENST00000527152 1677 ntBASIC17.62■□□□□ 0.41
RDH8Q9NYR8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 AP005435.1-201ENST00000529293 1178 ntBASIC17.62■□□□□ 0.41
RDH8Q9NYR8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 HCG11-201ENST00000411553 5696 ntBASIC17.62■□□□□ 0.41
RDH8Q9NYR8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RDH8Q9NYR8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RDH8Q9NYR8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms