Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL020996.1-203ENST00000536896 2307 ntBASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 AC233992.3-201ENST00000607491 485 ntBASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCM2LQ9NUG4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CCM2LQ9NUG4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCM2LQ9NUG4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCM2LQ9NUG4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AC004911.1-201ENST00000416316 871 ntBASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AC092437.1-201ENST00000624794 1048 ntBASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCM2LQ9NUG4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 ID1-201ENST00000376105 1233 ntBASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 AC136469.2-201ENST00000623944 1028 ntBASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2LQ9NUG4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2LQ9NUG4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 FP700111.2-201ENST00000619190 1892 ntBASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 YBX1P1-201ENST00000445822 960 ntBASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 MIR3181-201ENST00000578512 73 ntBASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCM2LQ9NUG4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 BX323043.1-201ENST00000641006 1765 ntBASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms