Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 AC069152.1-201ENST00000438030 544 ntBASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 AC026310.3-201ENST00000625186 2373 ntBASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
MKKSQ9NPJ1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 BX276092.2-201ENST00000417668 665 ntBASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 AC092118.2-201ENST00000613495 667 ntBASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MKKSQ9NPJ1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
MKKSQ9NPJ1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 AL137060.1-201ENST00000618151 2648 ntBASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MKKSQ9NPJ1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.44■□□□□ 0.7
MKKSQ9NPJ1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.43■□□□□ 0.7
MKKSQ9NPJ1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MKKSQ9NPJ1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms