Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC087289.5-201ENST00000586076 3175 ntBASIC20.41■□□□□ 0.86
SSU72Q9NP77 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 IGHV3-19-201ENST00000521488 291 ntBASIC20.41■□□□□ 0.86
SSU72Q9NP77 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.41■□□□□ 0.86
SSU72Q9NP77 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSU72Q9NP77 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
SSU72Q9NP77 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SSU72Q9NP77 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.4■□□□□ 0.86
SSU72Q9NP77 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.4■□□□□ 0.86
SSU72Q9NP77 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 AC061975.6-201ENST00000579045 1553 ntBASIC20.4■□□□□ 0.86
SSU72Q9NP77 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.4■□□□□ 0.86
SSU72Q9NP77 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSU72Q9NP77 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SSU72Q9NP77 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSU72Q9NP77 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.39■□□□□ 0.86
SSU72Q9NP77 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSU72Q9NP77 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSU72Q9NP77 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSU72Q9NP77 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
SSU72Q9NP77 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 AC233992.3-201ENST00000607491 485 ntBASIC20.38■□□□□ 0.85
SSU72Q9NP77 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSU72Q9NP77 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.38■□□□□ 0.85
SSU72Q9NP77 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.38■□□□□ 0.85
SSU72Q9NP77 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSU72Q9NP77 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SSU72Q9NP77 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSU72Q9NP77 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.36■□□□□ 0.85
SSU72Q9NP77 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms