Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 AL136162.1-201ENST00000607711 1078 ntBASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CHMP1AQ9HD42 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1AQ9HD42 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 IGHV3-19-201ENST00000521488 291 ntBASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 AC009237.3-201ENST00000393279 1427 ntBASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1AQ9HD42 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 GABARAPL3-202ENST00000624044 1851 ntBASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 AC006128.1-201ENST00000624704 1661 ntBASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 AC024257.2-201ENST00000549699 147 ntBASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP1AQ9HD42 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms