Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BRD9Q9H8M2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BRD9Q9H8M2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.29■■□□□ 1
BRD9Q9H8M2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.29■■□□□ 1
BRD9Q9H8M2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.29■■□□□ 1
BRD9Q9H8M2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.29■■□□□ 1
BRD9Q9H8M2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD9Q9H8M2 AC233263.1-201ENST00000578059 224 ntBASIC21.29■■□□□ 1
BRD9Q9H8M2 MIR4497-201ENST00000583208 89 ntBASIC21.29■■□□□ 1
BRD9Q9H8M2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
BRD9Q9H8M2 AC069544.1-201ENST00000609399 999 ntBASIC21.29■■□□□ 1
BRD9Q9H8M2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.29■■□□□ 1
BRD9Q9H8M2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD9Q9H8M2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.28■■□□□ 1
BRD9Q9H8M2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.28■■□□□ 1
BRD9Q9H8M2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.28■■□□□ 1
BRD9Q9H8M2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.28■■□□□ 1
BRD9Q9H8M2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.28■■□□□ 1
BRD9Q9H8M2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.28■■□□□ 1
BRD9Q9H8M2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.28■■□□□ 1
BRD9Q9H8M2 EP400NL-214ENST00000641289 2402 ntBASIC21.28■■□□□ 1
BRD9Q9H8M2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD9Q9H8M2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.28■■□□□ 1
BRD9Q9H8M2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.28■■□□□ 1
BRD9Q9H8M2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.27■■□□□ 1
BRD9Q9H8M2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.27■■□□□ 1
BRD9Q9H8M2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.27■■□□□ 1
BRD9Q9H8M2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
BRD9Q9H8M2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD9Q9H8M2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BRD9Q9H8M2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.27■■□□□ 1
BRD9Q9H8M2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.27■■□□□ 1
BRD9Q9H8M2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.27■■□□□ 1
BRD9Q9H8M2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.27■■□□□ 1
BRD9Q9H8M2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.27■■□□□ 1
BRD9Q9H8M2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BRD9Q9H8M2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 Z99916.2-201ENST00000604037 246 ntBASIC21.26■□□□□ 0.99
BRD9Q9H8M2 AC105020.6-201ENST00000621523 1217 ntBASIC21.26■□□□□ 0.99
BRD9Q9H8M2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD9Q9H8M2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 POM121L13P-201ENST00000422362 380 ntBASIC21.25■□□□□ 0.99
BRD9Q9H8M2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD9Q9H8M2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD9Q9H8M2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
BRD9Q9H8M2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD9Q9H8M2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD9Q9H8M2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD9Q9H8M2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms