Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.57■□□□□ 0.72
VCX3BQ9H321 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.57■□□□□ 0.72
VCX3BQ9H321 AC005082.1-201ENST00000413042 2259 ntBASIC19.57■□□□□ 0.72
VCX3BQ9H321 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.57■□□□□ 0.72
VCX3BQ9H321 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.57■□□□□ 0.72
VCX3BQ9H321 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VCX3BQ9H321 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VCX3BQ9H321 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 AL031602.1-201ENST00000633169 911 ntBASIC19.56■□□□□ 0.72
VCX3BQ9H321 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VCX3BQ9H321 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VCX3BQ9H321 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VCX3BQ9H321 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.55■□□□□ 0.72
VCX3BQ9H321 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.55■□□□□ 0.72
VCX3BQ9H321 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 KRT18P24-201ENST00000344739 1156 ntBASIC19.55■□□□□ 0.72
VCX3BQ9H321 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.55■□□□□ 0.72
VCX3BQ9H321 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.55■□□□□ 0.72
VCX3BQ9H321 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VCX3BQ9H321 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 RPS2P35-201ENST00000443417 897 ntBASIC19.54■□□□□ 0.72
VCX3BQ9H321 AL034346.1-201ENST00000568244 1277 ntBASIC19.54■□□□□ 0.72
VCX3BQ9H321 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 AP004607.7-201ENST00000527152 1677 ntBASIC19.54■□□□□ 0.72
VCX3BQ9H321 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 TCF3P1-201ENST00000423021 1937 ntBASIC19.54■□□□□ 0.72
VCX3BQ9H321 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VCX3BQ9H321 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.54■□□□□ 0.72
VCX3BQ9H321 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms